Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1871 |
Symbol | |
ID | 8119348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2139139 |
End bp | 2139975 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644852262 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003004200 |
Protein GI | 251789479 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGA TGAAGGAAAT GAGACAGCAG GGATCGCAAC TGCTGCGGGT GTGGAATGGC TTCTTCAATT TTTATGGCGC GGCGATGCTG CTGTTTCTGA TAGTGCCGGT GTTGGTGATT GTGCCGTTGT CGTTCAATGC CGGCTCGTTC CTCAGCTACC CGCTGGCCGG TTTTTCCCTG CGCTGGTATC GGGAGTTTTT CCATTCCAGC GAGTGGCTGA GTGCACTCGG TAATAGCCTG CTGATTGCGC CGCTGGCGAC GATACTGGCA ACCGTACTGG GCGTGCTGGC TTCCGTCGGG CTGGTACGCG GTGAGTTTCG CGGCAAATCG CTGGTGATGG CGGTACTGAT TTCACCGATG ATCGCGCCGG TGGTGATCGT CGCGGTCGGG ATGTTCTTCT TTTTCGCCAA GTTATCGCTG TTGAACAGCT ATATCGGGCT GGTGCTGGCC CATGCGGTGC TGGGCGTGCC GTTTGTGGTG ATTACCGTCA CCGCGGTGCT GAAAAATTAC GATCAGAACC TGACCCGCGC CGCCGCCAGT CTGGGCGCGC CGCCGCTGCT GGCGTTTCGT AAGGTGACGT TGCCGTTGAT CGCCCCCGGC GTATTCTCCG GCGCGCTGTT TGCCTTCGCT ACCTCGTTTG ATGAAGTGAT CGTCACGCTG TTTCTCGCCA GCCCGCGCCA GCGCACGCTG CCGTTACAGA TGTTCGCCGG GATCCGCGAA AACCTCGATC CGACCATCGC CGCCGCGGCG ACCATGATGG TGGCTGCCGC GCTGGTGTTG CTGGTGGTGA TGGAAGTCCT GCGTCGCCGT TCGGAGAAAT TGCGCGGCGG GCATTGA
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Protein sequence | MKPMKEMRQQ GSQLLRVWNG FFNFYGAAML LFLIVPVLVI VPLSFNAGSF LSYPLAGFSL RWYREFFHSS EWLSALGNSL LIAPLATILA TVLGVLASVG LVRGEFRGKS LVMAVLISPM IAPVVIVAVG MFFFFAKLSL LNSYIGLVLA HAVLGVPFVV ITVTAVLKNY DQNLTRAAAS LGAPPLLAFR KVTLPLIAPG VFSGALFAFA TSFDEVIVTL FLASPRQRTL PLQMFAGIRE NLDPTIAAAA TMMVAAALVL LVVMEVLRRR SEKLRGGH
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