Gene Xaut_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0859 
Symbol 
ID5422240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp957847 
End bp958653 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID640880101 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001415767 
Protein GI154244809 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATTC TCGCCATCAA CCGCATCTAT GCCGCGCTCT CGGCGCTGGT GCTTGCCTTC 
GTGCTGCTGC CGCTGGTGGC CATCGTGTGG GTGAGCTTCT TCGCCAACCG CATCCTCTCC
TTCCCGGCCA CCGGATACAC CCTCGACTGG TATGTCCGCG CCTGGGAGCA GGAGGCGTTC
CGCAACGGCT TCATCACCAG CATCGAGACC GCGCTGGTGG CGGTGGCCAT CTCGCTGGTG
CTGGGCGTGC CGGCAAGCCT GGCGCTGGTG CGCTATCGCT TTCCGGGGCG GGATGCCATC
CAGACCGTGC TGCTCTCGCC CATGGTGGTG CCTGGCATCG TCGGCGGCGC GGCCCTGTTC
ATGGCCTTCA TCGAGCTGGA AGTGCTGCTG GACGTGGAGA TCGCCGGCAC CCTGCCGGGC
CTGCTCATCG CCCATGGCCT CATCGCCTTG CCGTGGACGG TGAGGTTGGT GACGGCCTCG
CTGGTGGGCA TGAGTCCGTC CTTTGAGGAA GCGGCGCGCT CGCTGGGCGC GGGGGTGTTC
ACCACCTTCT TCCGGGTGAC GCTGCCCATC ATCAAGCCGG GCATCGTGGC GGCGGCGCTG
TTCTCCTTCG TGGTGTCCTT CATCGACCTT GAGAAGTCGA TCTTCCTGGT GGGGCCGGGC
CGCACCACGC TCCAGATCGC GCTGGTCTCG TATCTGGAAT GGAACCTTGA TTCCACGGTG
GCGGCGGTCG CGACCGTGCA GATCCTCATC ATCGGCGCGC TGCTGATCGC CAGCGACCGC
TATGCCCGCC TCGCGCGGGC GTTCTGA
 
Protein sequence
MGILAINRIY AALSALVLAF VLLPLVAIVW VSFFANRILS FPATGYTLDW YVRAWEQEAF 
RNGFITSIET ALVAVAISLV LGVPASLALV RYRFPGRDAI QTVLLSPMVV PGIVGGAALF
MAFIELEVLL DVEIAGTLPG LLIAHGLIAL PWTVRLVTAS LVGMSPSFEE AARSLGAGVF
TTFFRVTLPI IKPGIVAAAL FSFVVSFIDL EKSIFLVGPG RTTLQIALVS YLEWNLDSTV
AAVATVQILI IGALLIASDR YARLARAF