Gene PP_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0414 
Symbol 
ID1044136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp502968 
End bp503795 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID637143793 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionNP_742580 
Protein GI26987155 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.958357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCC CATACATGTC GCCCGTGGAG CGGGTCTGGT TCTACAGCCT GCGTATTCTC 
TGCGGCTTGA TCCTGCTGTT CCTGATCTTG CCAGTGCTGG TGATCGTGCC GCTGTCGTTC
AACAGTGGCA GCTTCCTGGT GTATCCGCTG CAGGGCTTCT CGCTGCAGTG GTATCAGGAC
TTCTTCGGCT CGGCCGAATG GATGCGTGCG TTGAAAAACA GCATCATCGT TGCCCCGGCG
GCCACGGTGC TGGCCATGGT GTTCGGCACG TTGGCGGCCA TCGGCCTGAC CCGTGGCGAT
TTCCCCGGCA AGTCGCTGGT GATGGCGCTG GTGATCTCGC CCATGGTGGT GCCGGTAGTG
ATCATCGGGG TGGCCAGTTA CCTGTTCTTC GCCCCTCTGG GTATGGGCAA CAGTTTCACC
TCGCTGATTC TGGTGCATGC GGTACTGGGT GTGCCGTTCG TCATCATTAC CGTGTCGGCG
ACGCTGCAGG GGTTCAACTA CAATCTGGTG CGTGCGGCGG CCAGCCTGGG CGCTTCACCT
CTGCTGGCTT TCCGCCGGGT GACCCTGCCG CTGATTGCGC CCGGTGTCAT CTCGGGAGCC
CTGTTTGCCT TTGCCACCTC GTTTGACGAG GTGGTGGTGA CGCTGTTCCT CGCCGGGCCG
GAGCAGGCAA CACTGCCGCG GCAGATGTTC AGCGGTATTC GCGAGAACCT GAGCCCGACC
ATTGCCGCGG CGGCGACCTT GCTGATTGCG TTCTCGGTGT TGTTGCTGCT GACCCTGGAG
TGGTTGCGTG GGCGTAGCGA GAAGCTGAGG ACTCAACAGC CGGCTTGA
 
Protein sequence
MLSPYMSPVE RVWFYSLRIL CGLILLFLIL PVLVIVPLSF NSGSFLVYPL QGFSLQWYQD 
FFGSAEWMRA LKNSIIVAPA ATVLAMVFGT LAAIGLTRGD FPGKSLVMAL VISPMVVPVV
IIGVASYLFF APLGMGNSFT SLILVHAVLG VPFVIITVSA TLQGFNYNLV RAAASLGASP
LLAFRRVTLP LIAPGVISGA LFAFATSFDE VVVTLFLAGP EQATLPRQMF SGIRENLSPT
IAAAATLLIA FSVLLLLTLE WLRGRSEKLR TQQPA