| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3393 |
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| Symbol | |
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| ID | 3721678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 458274 |
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| End bp | 459068 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640073060 |
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| Product | ABC opine/polyamine transporter, inner membrane subunit |
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| Protein accession | YP_354898 |
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| Protein GI | 77465395 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.381224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCC ACAAGACCTC GAAGCCGATG GGGATCCTCG TCGCGGTGCT CTTCCTCTAT
CTGCTCGCGC CGGTGATCCT CGTCTTCCCG ATCTCCCTCT CGGGCGACAG CGTGCTGCGC
TTTCCGCCGA CCTCCTGGTC CCTCCGCTGG TACGAGGCCC TGTTCGAGAA CCGAGCCATG
CTCGGCGCCT TCTGGACGAG CCTGTCGCTC GCGGCCATCG TCACCGTGCT CTCGCTGGTG
ATCGCGGTGC CGGCGGCCTG GGTGATGGTG CGGATGGAGT TCCGCGGGCG GGATCTCCTG
TTCAACCTCT TCACCGCGCC CCTCCTGCTG CCCACCATCG TGCTGGGGCT CGCCATCCTC
ATCGTCTTCG CCTCCTTCGG GCTTCTGGCG ACGATGCAGG GGCTGATCCT CGCCCATCTC
GTCATCACGC TGCCCTATGC GCTGCGCATT CTGGCCGTTT CGCTCGCCAC GCAGAACATG
GCCTGCGAGG AGGCCGCAAA GACCCTCGGC GCGAAGCCCC TCACCGTCTT CTTCCGGGTG
ACGCTGCCGA TGCTCACCCC GGGGATCGTG GCGGCGGCGG CGCTCTGCTT CCTCGTCTCC
TTCGACGAGG TGGTGATCAC GCTCTTCCTC ACCGGGCCGC GCATCAGCAC GCTGCCGGTC
GAGCTCTACA ACTACGTCTA CAACACCGCC GATCCGCTGG TGGCCGCGGC CTCCGTGCTG
CTGATCCTGC TGACGCTGGG CGTGATCCTC GTGGTCGAGC GCGCGATGGG CCTCGGGCGG
GCCTTCGTGA AGTAA
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| Protein sequence | MQIHKTSKPM GILVAVLFLY LLAPVILVFP ISLSGDSVLR FPPTSWSLRW YEALFENRAM
LGAFWTSLSL AAIVTVLSLV IAVPAAWVMV RMEFRGRDLL FNLFTAPLLL PTIVLGLAIL
IVFASFGLLA TMQGLILAHL VITLPYALRI LAVSLATQNM ACEEAAKTLG AKPLTVFFRV
TLPMLTPGIV AAAALCFLVS FDEVVITLFL TGPRISTLPV ELYNYVYNTA DPLVAAASVL
LILLTLGVIL VVERAMGLGR AFVK
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