| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3639 |
|---|
| Symbol | |
|---|
| ID | 4899012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 737686 |
|---|
| End bp | 738492 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640114247 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001045501 |
|---|
| Protein GI | 126464388 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.344703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAG CGCGGAAGAC CCTGTGGGAC CATGTGTTCA CCCTGCTGGT GACGCTGATC
TACATCTTCC TGATCGCGCC CATCCTGCTC GTGGTGCTGC TCTCGTTCTC GGGCGGCGAG
TTCCTGGCCC TGCCGATGGA GGGCGTGTCG CTCCGCTGGT TCGAGGCGCT GTTCAACAAC
AGCCGGTTCT ACGAGGCGGC CGCCCATTCC TTCAGCCTTG CGCTGGTCTC GGCGCTGGTC
AACGGCGTCA TCGGCACGCT CGCTGCGATC TATGTGATCC GCTTCGCGCC GCCGCAGATG
ACGAACCCGC TGCGCGTCCT GATGAGCGCG CCGCTGATGG TGCCCGAGAT CCTGACCGCC
ATCGCGCTGC TGTTCTTCTT CTTCGAGGTG GGCGTGGGCA ACCGCTGGTC GGTGGCGATC
CAGATCGGGC ATGTCCTCGT GACCTTCCCC TATGTCTTCC TGAACGTGGC CTCGGCGCTG
TTCAACTTCG ACCGGTCGCA GGAAGAGGCC GCGCGCAGTC TCGGCGCGAA CGGCTGGCTC
ACCTTCCGTC GCGTGACGCT GCCCGCGATC AAGCCGGGGG TCATCACCGG CTGCCTCTTC
GCCTTCGTGA TCTCCTTCGA CATCTTCAAC ATCTCGCTGC TGCTGAAGTC CGTGGGAAAG
AACACCCTGC CGCTCGAGCT CTTCGACTAT CTGCGCTACA ATTTCGACCC GACCGCGGCG
GCGGTGGCGA CCGTCAGCAT CGGGCTGACC TTCGTGGCCG TCCTGATCGT CGATGCCACC
GTCGGATTGC GCTCGCTGAG GTTCTGA
|
|---|
| Protein sequence | MTGARKTLWD HVFTLLVTLI YIFLIAPILL VVLLSFSGGE FLALPMEGVS LRWFEALFNN
SRFYEAAAHS FSLALVSALV NGVIGTLAAI YVIRFAPPQM TNPLRVLMSA PLMVPEILTA
IALLFFFFEV GVGNRWSVAI QIGHVLVTFP YVFLNVASAL FNFDRSQEEA ARSLGANGWL
TFRRVTLPAI KPGVITGCLF AFVISFDIFN ISLLLKSVGK NTLPLELFDY LRYNFDPTAA
AVATVSIGLT FVAVLIVDAT VGLRSLRF
|
|---|
| |