Gene Xaut_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0865 
Symbol 
ID5422426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp963492 
End bp964286 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID640880107 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001415773 
Protein GI154244815 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA ACCGGATCGG CCTCCTCGTG GGTACCATCG CCGTGACGGT GATGGTGTTC 
CTCATCCTGC CCCAGCTCAT CCTGCTGGTG CAGTCGTTCA CGGCGGAGGA TTATCTGTCC
TTCCCGCCGA AGCATTTCGG GCTGCGCTGG TACGCCTTCA TCTTCGGCGA TGAGACCTGG
CAGCGGGCGC TGTTCACCAG CCTCCTCATC GCCGTGCTGG TGACGCCGCT CGCCGTCATC
CTCGGCACGG CGGCGGCCAT CGGGCTCGAC CGGGGTCCCA TGCGCCTGCG CAAGGCCATG
CGCACTGCTT TGGTGTCGCC CATGGTGCTG CCCCACGTGG TGCTGGGCAT GGCCATCTAC
CGGGTGTTCC TGCCGCTGCG CTTCGACGAC ACGCTCGCGG GCTTCCTGGT GGCGCATCTG
GTCTTGTGCG TGCCCTATGT GATCGTCACG GTGGGGGCGA GTCTCCAGGC CATGGACCGC
TCGCTGGAAC AGGCCGCCAT GAGCCTCGGC GCCTCGCTTC CAGTGGCCTT GTGGCGGGTG
GTGCTGCCGC TGGTTCGGCC GGGGGTGATC GCGGGGGCGG TGTTCGCCTT CATCACCTCG
TTCGACGAAT TCATCGTCAC CTACTTCCTG GCGAGCCGGC AGACCACCGC GCCCATCCAG
ATCTTCTCCA GCCTGTCCTA TCAGCTGGAG CCGTCCATTG CGGCGGTTTC GGGCCTCACC
CTGGTGGTGA CGGCGGCCCT GTGCGGCCTG CTCATCCTGC GTGGGAGCAT GGCGGGCACG
GCGCAGGTGG CGTGA
 
Protein sequence
MSENRIGLLV GTIAVTVMVF LILPQLILLV QSFTAEDYLS FPPKHFGLRW YAFIFGDETW 
QRALFTSLLI AVLVTPLAVI LGTAAAIGLD RGPMRLRKAM RTALVSPMVL PHVVLGMAIY
RVFLPLRFDD TLAGFLVAHL VLCVPYVIVT VGASLQAMDR SLEQAAMSLG ASLPVALWRV
VLPLVRPGVI AGAVFAFITS FDEFIVTYFL ASRQTTAPIQ IFSSLSYQLE PSIAAVSGLT
LVVTAALCGL LILRGSMAGT AQVA