| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1236 |
|---|
| Symbol | |
|---|
| ID | 4010748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1291733 |
|---|
| End bp | 1292536 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637953826 |
|---|
| Product | ABC spermidine/putrescine transporter, inner membrane subunit |
|---|
| Protein accession | YP_556446 |
|---|
| Protein GI | 91781239 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.362839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCG CATTGGCTCC GTCGCGCTGG ACCACGCTGC TGGCGCTCGC GCTGTGTGTG
GTGATCGTCG CGCCGCTGGC GATCCCGGTT GCCGTATCGT TTTCGGACAG CGTGCTGGTC
GGCTTTCCGC CGCATGGACT GACCCTGCGC TGGTACGGGA AGGTCCTGGC CGACGCGGAT
TTCCGCGACA CCTTCCTGTT CAGCGCCGAG CTGGGCGCGA TGGTGACACT GGTGTGCATT
GCGCTCGGCT TGCCGTGCGC GCTCGGCCTC GCGCGCTGCG AGTTCCCGGG CAAGACGCTG
GTCAACGGGC TGGTCCTGGC GCCGCTGATC TTCCCGGTGC TGGTGGCAGG CGTTGCACTG
TTGCAATGCG CGAACGCGCT CGGCATTACG GATTCGTTGT GGCTGCTCAC GCTCGGGCAT
GTGGCGATCT GCTTGCCGTA TCTGGTACGC AGCGTGTCGG CTGCGCTGCT GGTGATGCCG
CGCACGACCG AGGACGCCGC GCGCACGCTC GGCGCGAATC CGTGGGTCAC TTTTCGACGG
ATCACGTTGC CACAAGTGGC GGGCGGGGTG TCGGCCGGGG CGGTGTTCTG CTTCGTCACG
TCGTTCGACG ATTACACGAT GGCGATGTGG CTCGCCGATG CGCGCCACTT CACCTTGCCG
CTGCAGGTGG GCGTATTCAT CGAGCGATCG TTCGATCCGG GTGTCGCGGC GATTGCCGGA
CTGATGATCG GTTTCTCGGT GCTGCTGATC GTGTTCGTCG AGCGCGTGCT CAAGGTCAAG
CTGGAAAAAT TCGTGATCGG GTGA
|
|---|
| Protein sequence | MKAALAPSRW TTLLALALCV VIVAPLAIPV AVSFSDSVLV GFPPHGLTLR WYGKVLADAD
FRDTFLFSAE LGAMVTLVCI ALGLPCALGL ARCEFPGKTL VNGLVLAPLI FPVLVAGVAL
LQCANALGIT DSLWLLTLGH VAICLPYLVR SVSAALLVMP RTTEDAARTL GANPWVTFRR
ITLPQVAGGV SAGAVFCFVT SFDDYTMAMW LADARHFTLP LQVGVFIERS FDPGVAAIAG
LMIGFSVLLI VFVERVLKVK LEKFVIG
|
|---|
| |