| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3236 |
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| Symbol | |
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| ID | 3935708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3284092 |
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| End bp | 3284880 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905608 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511178 |
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| Protein GI | 89055727 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0387101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.554966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC GCACCCACCC GCTTTTGATC GTGATGACCG TGCTGGTCTA TTTCTTCCTG
CTCGGGCCTT TGGTCATCAT CTTCGGGGCG TCCGTCTCTG ACACCACATT TCTTGCCTTC
CCGCCCCAGG GCCTGACGCT GCATTGGTTC GAGAACATCT GGGAGATCTC GGCCTTCCGG
CGCACCATCG TGACGTCGTT CCAAGTGGCC ATCATGGGCA CGCTTCTGGC GCTTTTGATC
GGAATCCCCG CCGCCTATGC CCTGAACCGC CACCGCATCC ACTTGCCCGG ATGGCTATCG
ACTTTGTTCA TCCTGCCCAT TCTGGTGCCC GAGATTGTCA TCGGCTTCTC GCTCCTGCGG
TCTGTCAACG TTGGCCTTGG CGTCCCGGTC TTTGCGTCGC TTCTGATCGG GCACACGCTG
TTGGTGCTGC CCTACGTCGT GCGCGTGATT TCCGCCGCGT TGGCGTCGTT CGACTTTTCC
ATCGAGGAGG CCGCGATTTC GCTCGGCAGC CATCCGGTTA AGACCTTCTT CACCATCGTT
CTGCCCAATG TCCGCTCCGG CGTGATTGCG GCCTTCATCC TCGCGTTCAT CACCTCAATC
AACGACGTGT CGGTGTCGCT GTTCCTGACC GGCCCCGGCA TCTCGACGCT GCCGATCCAG
ATCCTCGCCC ATGTGGAGCA GTTCTTTGAC CCGACCGTCG CGTCCGTCTC CGTCCTACTG
ATGATGCTGA CCATCATCGT CATGATCATC GTCGAACGGA CGCTGGGTCT GACGATCGTG
GCCAAGTAA
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| Protein sequence | MTHRTHPLLI VMTVLVYFFL LGPLVIIFGA SVSDTTFLAF PPQGLTLHWF ENIWEISAFR
RTIVTSFQVA IMGTLLALLI GIPAAYALNR HRIHLPGWLS TLFILPILVP EIVIGFSLLR
SVNVGLGVPV FASLLIGHTL LVLPYVVRVI SAALASFDFS IEEAAISLGS HPVKTFFTIV
LPNVRSGVIA AFILAFITSI NDVSVSLFLT GPGISTLPIQ ILAHVEQFFD PTVASVSVLL
MMLTIIVMII VERTLGLTIV AK
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