Gene Veis_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0786 
Symbol 
ID4693665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp868652 
End bp869449 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID639848561 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995584 
Protein GI121607777 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA TCCACAAGAC ATCCTGGCCC ATGCGCTTGC TGGTGCTGGT CCTGTTCGCC 
TACCTGCTGG CGCCGGTGAC CCTGGTCTTG CCGCTGTCGT TTTCGGGCGA TCAGGTGCTG
CGCTTTCCGC CGAGCTTCTG GTCGACGCGC TGGTACACGG CATTGTTCGG GAACGCGCAA
ATGCTCAAGG CATTCTCGAC CAGTCTGGTG TTGGCCACGA TCGTCACCAC GGTGTCTATC
GTGGTTGCCG CCCCGGCGGC CTGGGCGCTG GCCCGGCTCG ACTTTCGCGG CAAGCAACTG
CTGCTGAACC TGTTGACGGC GCCGCTGCTG CTGCCGAGCA TCGTGCTGGG CCTGGCCATC
CTGATCGTCT TTGCGGCCTT GGGTTTGCTG GCCACGATGC AGGGCCTGGT ATTGGCCCAT
CTGGTGCTGA CCCTGCCTTA CGCGCTGCGG GTGCTGGCGG TGTCGCTGAG CACCCAGGAC
CGCGCCTGCG AGGAGGCCGC GCGCACCCTC GGGGCCAAGC CGATGGTGGT GTTCTTCAGG
GTCACCGTGC CACTGATGCT GCCGGGCATC GTGGCCGCGG CGGCCCTGTG CTTTCTGGTG
TCGTTCGATG AAGTGGTGAT CAGCCTTTTT CTCACCGGCC CGCGCATCAC GACGCTGCCG
GTCGCGCTCT ACCACTACGT CTACAACCAG GCCGACCCGC TCGTTGCCGC CGCCTCGGTG
TTGTTGATCT TGCTGACGCT GGCCGTGATC ATGATCGTCG AACGGGCGCT GGGATTGGGC
CGGGCCTTTG TCCGATAG
 
Protein sequence
MLEIHKTSWP MRLLVLVLFA YLLAPVTLVL PLSFSGDQVL RFPPSFWSTR WYTALFGNAQ 
MLKAFSTSLV LATIVTTVSI VVAAPAAWAL ARLDFRGKQL LLNLLTAPLL LPSIVLGLAI
LIVFAALGLL ATMQGLVLAH LVLTLPYALR VLAVSLSTQD RACEEAARTL GAKPMVVFFR
VTVPLMLPGI VAAAALCFLV SFDEVVISLF LTGPRITTLP VALYHYVYNQ ADPLVAAASV
LLILLTLAVI MIVERALGLG RAFVR