| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8304 |
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| Symbol | |
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| ID | 7365256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 228990 |
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| End bp | 229787 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643641861 |
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| Product | ABC transporter |
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| Protein accession | YP_002540158 |
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| Protein GI | 222080294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0178234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATG GGCCCATCGC ACTTCTGTTC AACACCCTCT TTGTAATTTT CCTTCTGGCA
CCGATGGTGC TCGTTTGCCT GATCGCGTTT ACGCCGGAGA ACTATCTCGC ATTGCCAACC
AACGGTTTCT CATTGCGTTG GTTTCAACGG CTAACCGAAC GACCGGAGTT CTTCGAGTCG
TTTAAAACGA GCGTCGGAAT TGCACTTGCA TCAACTGTCA TAGCACTGCT GTTCGCTGTC
CCGGCTGGCC TCGCGATCGC CCGCTATCGT TTCCTCGGTC GCGCAGCCTT GAATGCGCTG
TTTCTGTCAC CGTTGATGCT CCCGCATGTG GTTCTTGGTA TTGCCTTTCT TCGCTTCCTG
ACCGAAATCG GCATTTCCGG TACCACGACA GGCCTAATCA TCGGGCACAT CGTGATCGTG
TTCCCGTTCG CAATGCGTAT GATCCTTGCA AGCGCCTCGG GGATGGATAT GCGGATCGAA
GACGCGGCCG CTTCCCTCGG CGCCGGTCGA CTGACGATAT ACAAGCGGAT CATTCTGCCG
CTGATCGTAC CGGGAATTGC AAGTGGCTTT GCATTATCGT TCATTCAAAG TTTTGACGAA
ACCACGATGA CCATCTTCGT CGCATCGCCG ACGACAACCA CGTTGCCGGT CCAGATGTTC
AACTACATTC AGGATAATAT CGACCCACTC ATCTGCGCCG TCTCCGCGCT GCTTATTCTT
TTCACCGTTA TCCTCATGGT GATCTTGGAT CGGTTGTACG GACTTGAGCG CCTCTTCGTT
GGTGAGGGTC AGGCGTGA
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| Protein sequence | MKNGPIALLF NTLFVIFLLA PMVLVCLIAF TPENYLALPT NGFSLRWFQR LTERPEFFES
FKTSVGIALA STVIALLFAV PAGLAIARYR FLGRAALNAL FLSPLMLPHV VLGIAFLRFL
TEIGISGTTT GLIIGHIVIV FPFAMRMILA SASGMDMRIE DAAASLGAGR LTIYKRIILP
LIVPGIASGF ALSFIQSFDE TTMTIFVASP TTTTLPVQMF NYIQDNIDPL ICAVSALLIL
FTVILMVILD RLYGLERLFV GEGQA
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