| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1479 |
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| Symbol | |
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| ID | 4201314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1677182 |
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| End bp | 1677964 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082357 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_695922 |
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| Protein GI | 110798708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0195961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGAAGA GCAAAGTATT AACAACCTTC GTTGTTTTGG TTTATATATT TCTATTTGCA
CCGCTAGTAA TTATTGCCAT GACTAGTATA GGAACAGAAA ATTATATAGC ATTTCCTCCA
AAAGGATTTA GTTTGCAATG GTTTATTACA GTATTTAAAT CTGAGTCATT TATAAAAAGT
ATGGGGACAA GCTTCTTAAT ATCTACAGTA TCTACATTAT CAGCTTTGGT TATAGGAATG
CCAGCGGCTT ATGGATTAAG TAGATATAAC TTCAAAGGAA AAGATATTCT TAAGAGTTTC
TTCTTTTCGC CTTTAATAGT TCCTGGAATA GTAGTCGGAT TCTCATTGTT TCAGTTTTTA
TTGGTAAAGA TGAACTTATC AGTATATGCT AGTTTGTTTA TTGGACATAC TTTAATAATA
ATTCCTTACA TCATAAGAGT TGTAGGATCA AGTTTAGAGG GATTTGATTA TTCCATAGAG
GAAGCAGCTA TGAGCTTAGG ATGTAAAAAA TCACAAACTT TCTTTAAAGT AGTTTTACCA
AATATAACAT CAGGGGTAAT GGCAGCATTT ATGTTAGCTT TTATAAATTC ATTTAACAAT
GTTCCAGTAT CTATATTTCT AACTGGACCA GGAGTAAGCA CATTACCTAC AACTATGATG
AACTATGTTG AATATAATTA TGATCCAACA GTATCAGCTT TATCAGTAAT CTTAATGATA
TTAACTATTG GAATTATGTA CATATTAGAA AAAACATTAG GATTAAATAA TTTTGCAGGA
TAG
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| Protein sequence | MKKSKVLTTF VVLVYIFLFA PLVIIAMTSI GTENYIAFPP KGFSLQWFIT VFKSESFIKS
MGTSFLISTV STLSALVIGM PAAYGLSRYN FKGKDILKSF FFSPLIVPGI VVGFSLFQFL
LVKMNLSVYA SLFIGHTLII IPYIIRVVGS SLEGFDYSIE EAAMSLGCKK SQTFFKVVLP
NITSGVMAAF MLAFINSFNN VPVSIFLTGP GVSTLPTTMM NYVEYNYDPT VSALSVILMI
LTIGIMYILE KTLGLNNFAG
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