| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1923 |
|---|
| Symbol | |
|---|
| ID | 9245773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2342953 |
|---|
| End bp | 2343741 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003679856 |
|---|
| Protein GI | 297560882 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.438917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGA GACGCCCCTT CCTGTCGCTG CTCGCGGCGG CGGCCTTCGT CCTCATGCTC
GGCCCCGTGG TGATCCTGGT CGGGGTCGCC TTCACCGCCG GGAGCACCCT GGCCTTCCCG
CCCGAGGGCC TGTCCCTGCG CTGGTTCGCC GCCGCCCTGG ACTACGGGCC CTTCGTCGAC
TCCTTCGGCA CCAGCGTCGC CGTGGCGCTG GCCTCCACCG CGATCGCCCT GCTCCTGGGC
GTTCCGGCGA CCCTGGCCCT GCACCGGGGC AACCCGCGCG GGCGCAGGGT GATGGAGAAC
CTCTTCTTCG CCCCGATCGT GGTCCCCGAA CTCGTCCTGA GCCTGGCCCT GTTCCAGCAG
CTCATGGTGG GCATGCGCGT CACCGCGCTG GGCGCGCTGA TCGTCGGGCA CACCGTCCTG
CTGCTGCCCT ACACCGTCCG CGTGGTGGGC GCCTCGCTGT CGCTGGCCGA CGCGCGCCTG
GAGGAGGCCG CCCGGGGGCT GGGGGCCGGG CCGGTGCGGG CCTTCTTCAC CGTGACCCTG
CCGGTCATGG CGCCGGGCAT CCTGTCCGCC ACCATCCTGG CCTTCATCAC CTCCCTGAAC
AACGTTCCCC TGTCCCTGCT GCTCACCGGC CCGGGCGTGG CGACGCTGCC GGTGGAGATG
CTCAACTACG TCCAGTCCTC GTTCGACCCG GTGGTCGCGG CGGTCAGCGT GCTGCTCCTG
GTGCTCAGCG TCGCGGTCGC CTTCGCCACC GAACGCATGG TCGGTTTCAC GAAGGTCTTC
GGCCGCTAA
|
|---|
| Protein sequence | MILRRPFLSL LAAAAFVLML GPVVILVGVA FTAGSTLAFP PEGLSLRWFA AALDYGPFVD
SFGTSVAVAL ASTAIALLLG VPATLALHRG NPRGRRVMEN LFFAPIVVPE LVLSLALFQQ
LMVGMRVTAL GALIVGHTVL LLPYTVRVVG ASLSLADARL EEAARGLGAG PVRAFFTVTL
PVMAPGILSA TILAFITSLN NVPLSLLLTG PGVATLPVEM LNYVQSSFDP VVAAVSVLLL
VLSVAVAFAT ERMVGFTKVF GR
|
|---|
| |