Gene M446_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3856 
Symbol 
ID6131995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4302267 
End bp4303079 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID641644021 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770663 
Protein GI170742008 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGCG CTCTCGTCGA TCGACCGACC CGCGCATGGC GCCTCGCCGG GGGCTTGGCG 
GCCTGGGCCG GGTTCCTGTT CCTGCTCATG CCGACGCTGA TCATCGTCCC GATCTCGCTC
GGCGGGGCGC GCGAGCTCAG CTTCCCGCCG CGGGAGCTCT CGTTCGGCCT CTACCGGGAG
TTCTTCACGG ACCCGTCCTG GTGGGGCGCG ACACTCCAGA GCCTGAAGAT CGGCATTCTC
ACGATGGTGA CGAGCCTCGT CCTGGCGGTG CCGGCCTCCT ACGCGCTCGT GCGCGGGGCC
TTTCGCGGGC GCCGGGCTCT CAACCTTTTC CTGGTCAGCC CGATCCTCGT ACCGGTCGTC
GTTCTCGGGC TCGGCTTCTA CCTCCAGTTC GCTGGGCTCG GCATCGGCGG CACCGACCTG
AGCCTCGTTC TGGCTCACAC GGTCCTGGTT TCACCATTCG TGATCGTGTC CGTCTCGGCC
GGCCTGCGGC AGATCGATCC CGCGCTTGAG ACCGCCGCGA CGATCATGGG CGCGGGCCGC
GCGCGGGTGT TCTTGAAGAT CGTGCTGCCT CAGATCCGCG GCTCCCTCGC CGTCGGTGCC
CTGTTCGCGT TCCTCCTGTC CTTCGACGAG GTCGTGGCTT CGTATTTCGT CAGCGGTCCA
GCCACGATGA CCCTTCCGGT GAAGATGTAC AGCGCTCTGC GCTGGGAAAT TTCACCCGTG
ATCGCGGCCG TCTCCGCGAT CCTCACCGCG ATCTCGCTGG CCTTCAGCCT CGCGATGCTT
CGCCTGCAAA CCGATACGAC CGGACACTCA TGA
 
Protein sequence
MNRALVDRPT RAWRLAGGLA AWAGFLFLLM PTLIIVPISL GGARELSFPP RELSFGLYRE 
FFTDPSWWGA TLQSLKIGIL TMVTSLVLAV PASYALVRGA FRGRRALNLF LVSPILVPVV
VLGLGFYLQF AGLGIGGTDL SLVLAHTVLV SPFVIVSVSA GLRQIDPALE TAATIMGAGR
ARVFLKIVLP QIRGSLAVGA LFAFLLSFDE VVASYFVSGP ATMTLPVKMY SALRWEISPV
IAAVSAILTA ISLAFSLAML RLQTDTTGHS