| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8149 |
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| Symbol | |
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| ID | 7365064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 101950 |
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| End bp | 102750 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641766 |
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| Product | ABC transporter |
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| Protein accession | YP_002540063 |
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| Protein GI | 222080200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.828592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTG ATCAACCCGG TGTTGGCTGG CCGCTAAAAA TCTTCACGGC GCTGGTCTAC
ATGTTTCTCT TTGGACCCGT CGCCGCGGTG ATCCTGCTTT CGTTCAACAC CGCCGACTTT
GCTTCCTTCC CCATGCAAGG GGTCGGGCTC CGCTGGTTCG CCGAGCTTTT TCAGAACGAG
AGTGTCATGC GGGCGCTCAA GACGTCGCTG GTGCTCGGTG TTTTGACCGC CGGCATCTGT
GGTGTGGTGG GAGTATTGGC CGCCATTGCG CTTGCCCGAT ATGAATTTCG AGGTAAGCGG
CTCATGAACG TCTTTCTGCT GACACCGCTT CTCGTTCCCG AGACGGTTCT CGCCGTGGGG
CTTCTGTTGT TCATGCAGTT GTTCAAGCAG CCGCGCAGTT TTAGCCTACT GTTGATGGGC
CACATCATGC TGGCGCTGCC CTATGTGGTT CTGGTCGTTC ATGCGCGCCT CATCACAATC
CAGAAGACCT TTGAGGAAGC GGCTGCGACG CTGGGTGCCA ACCGGTTGCA GGTTTTCCGC
GAAGTCACCC TTCCGCTGCT CATGCCAGCA GTTGTCGCAG GGTTGCTGTT GTCATTCACC
CTGTCGTTCG ACAACGTCAC CGCCTCGATC TTTTGGCGGC CGATCGGCAC GGAAACGCTT
CCCACTGAAA TCTACAGCAT GCTCCGGGAC TCGGTGAGCC CTGAGATCAA TGCGCTGGGA
ACGGTGATGG TCGCGATCAC GATCGGGCTG CCGCTGCTGG GTATCGCCTT CTTCCGAATC
AGGTCGCAAA GGCGGCTTTA G
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| Protein sequence | MNADQPGVGW PLKIFTALVY MFLFGPVAAV ILLSFNTADF ASFPMQGVGL RWFAELFQNE
SVMRALKTSL VLGVLTAGIC GVVGVLAAIA LARYEFRGKR LMNVFLLTPL LVPETVLAVG
LLLFMQLFKQ PRSFSLLLMG HIMLALPYVV LVVHARLITI QKTFEEAAAT LGANRLQVFR
EVTLPLLMPA VVAGLLLSFT LSFDNVTASI FWRPIGTETL PTEIYSMLRD SVSPEINALG
TVMVAITIGL PLLGIAFFRI RSQRRL
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