Gene OEOE_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1465 
Symbol 
ID4415950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp1379841 
End bp1380629 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content38% 
IMG OID639669639 
Productspermidine/putrescine ABC transporter permease protein 
Protein accessionYP_810991 
Protein GI116491447 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACGA ATAAGCACTT ACTTACGAAA ATAATTGGGA TTGTGACGAT TGTGTTCCTT 
GTTTTTCCAC TGATTTTGAT AGTCGTAACA TCATTTGGAA CTGAGCCAAC TATTTCTTTT
CCAATCAAAG GCTTTACTTT TGCTTGGTAT GCAAACATTT TTTCTCAGGA TTCTTTTACT
CAAGGTTTTA TAACCAGTGT CGTGATTGCA TTATTGGCAT CGCTTGCTTC TGCCTTGGTT
GGCCTTCCAG CTGCTTATGC TTTGACAAGG GGTGAGACAA AGTTCAGTCA TTTCTTAGAA
AGTGTTTTCT TGGCACCGGT TATGGTTCCT GAGGTTGTTC TTGGTTTCTC CTTGTATTCG
TCTCTTGTTA TATATGCCCG TTTTCCATTA TTTCTCAGCC TCCTTTTTGG ACATTTTCTA
ATTTGTATGC CGTATACGAT TAGGCTGCTT ATTGGCGGTT TGGAGCAATT TGATTCAAGT
ATAGAAGAGG CAAGTTGGGT TCTGGGAACT TCTCGTTTAT CTGGATTTTT CAAAATGGTT
TTGCCAAATA TTTCCACCAG TATTATTTCC GGATTTCTTT TGTCCTTTAT CAATTCTTTT
AATAACATTC CGGTATCTGT ATTTTTAAGC GGAGCAAACG TGAATATGTT GCCGACGTCA
ATTCTAAATT ATCTGCAAAA CAATTACGAT CCGACTGTTT CGGCAATTTC AACCTGCTTG
ATGTTGCTAA CACTTATATT CATGCTGATG GCTGAAAAGA AATTAGGCCT GAAAAGCTTA
ATCAATTAA
 
Protein sequence
MTTNKHLLTK IIGIVTIVFL VFPLILIVVT SFGTEPTISF PIKGFTFAWY ANIFSQDSFT 
QGFITSVVIA LLASLASALV GLPAAYALTR GETKFSHFLE SVFLAPVMVP EVVLGFSLYS
SLVIYARFPL FLSLLFGHFL ICMPYTIRLL IGGLEQFDSS IEEASWVLGT SRLSGFFKMV
LPNISTSIIS GFLLSFINSF NNIPVSVFLS GANVNMLPTS ILNYLQNNYD PTVSAISTCL
MLLTLIFMLM AEKKLGLKSL IN