| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1894 |
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| Symbol | |
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| ID | 6284405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2126771 |
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| End bp | 2127568 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621458 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001895526 |
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| Protein GI | 187923884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00977235 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.387076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA ACGGCATTCT CGGGCTCGTC TACAACGCGT TCTTTATGAC CTTCATCCTC
GCGCCGCTCG CGGTGGTGAT GCTGGTGGCC TTTACCGACA AGGGCTTCAT CTCGATGCCT
TTCGATGGCG CGTCGCTGCG CTGGTTCCGC GCGATCATCG AGAACGGCGA CATCGTCGCG
GCCTTCTGGC TGTCGGTGCG GCTCGCGTTC GCGGCGGCGA GCATCGGCGT GCTGCTCGCG
GTGCCCGCCG CGCTGGCGAT CGCGCGTTAT CGTTTTCCGG GCCGCGCCGC GCTCACCAGT
TTCTTCCTCT CGCCGATGAT GATTCCCGCG GTCGTGCTCG GCATTGCGTT CCTGCGCTTT
CTGTCGCTGC TGCATCTGTC GGGATCGTTT TGGTCGCTGG TCTGCGCGCA CGTGATCATC
GTGCTGCCGT ATGCGTTGCG CCTCGCGCTG TCGTCGGCCG TCGGACTCGA TCGCGACGCC
GAACGCGCCG CGCTTTCCTG TGGCGCGAGC CGCTTCACCG CGTTTCGCCG CGTGGTCCTG
CCGATGATCC GCACCGGCGT GGCGGGCGGC TGGGTGCTCT CGTTCATCCA GAGTTTCGAC
GAACTGACCA TGACCATCTT CGTCGCGACA CCGGGCACGA CCACGCTGCC CGTCGCCATG
TACAACCAGA TCGCGCAGAC GATCGATCCG CTGGTCGCTT CGGTGTCGGC GGTGCTGATC
GTCGGCACGG TCCTTCTGAT GATCCTGCTC GACCGCATGG TCGGACTGGA TCGCATTCTG
ATCGGAGAAA CCCGATGA
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| Protein sequence | MKQNGILGLV YNAFFMTFIL APLAVVMLVA FTDKGFISMP FDGASLRWFR AIIENGDIVA
AFWLSVRLAF AAASIGVLLA VPAALAIARY RFPGRAALTS FFLSPMMIPA VVLGIAFLRF
LSLLHLSGSF WSLVCAHVII VLPYALRLAL SSAVGLDRDA ERAALSCGAS RFTAFRRVVL
PMIRTGVAGG WVLSFIQSFD ELTMTIFVAT PGTTTLPVAM YNQIAQTIDP LVASVSAVLI
VGTVLLMILL DRMVGLDRIL IGETR
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