Gene Rleg2_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3161 
Symbol 
ID6981912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3244089 
End bp3244868 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID643397877 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002282654 
Protein GI209550737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC GCCTGTTTTC GCCCGTGGTG CTTTTCCTGC TGCTGGTCTT TCTGATCGGC 
CCGTTCCTGA TCATCATCGC CGCTTCGCTG TCATCAGGCG ATACGCTGGC CTTCCCGCCG
CAGGGACTGT CGCTGCGCTG GGTCATGAAG GTGTTCACCG TCGAGAGTTT CCGCGACAGC
TTCGCCATGT CGATGTTCCT TGCCGTCTTC GGGACGCTGA CAGCCCTCCT CCTCGGCATC
CCGGCCGCCT ATGCCCTGTC GCGCTACCGG CTGCCGGCGG CCGAAACCGT CCGCACCGTC
GTCTCGCTGC CGATCATCGT CCCCGGCATC ATCGTCGGCC TGGCGCTGCT GCGTTATCTC
GTCGTGCCCT TCGGCTTCAA CATCACGCTC GCGCTGTTCT TTGCCCATAC CGCCCTGGTG
CTGCCCTATG CCGTGCGCGT CGTCTCGGCG AGCCTCGACA ATCTGCGTTC GGATATCGAG
GAGGCCGCCG TGCTGCTCGG CTCCTCCAGG CTCGGCGCCT TCTTCCGCGT GGTGATGCCG
AATATTCGCG GCGGCATTCT GGCCGCCTTC ATCCTCGGCT TCGTCACCAG CTTCAATCAG
GTGCCGGTCT CGCTCTTCCT CTCCGGCCCC GGCGTCCGGA CGCTGCCGAT CGACATGCTG
GGCTACATGG AAACCACCTA CGATCCGTCC ATTGCAGCGC TCTCCGCCCT TCTCGCCTTT
CTTTCCATCG GCATCGTCTT CCTCGCCGAA CGCTTCCTGG GATTCTCGCG TTATGTCTGA
 
Protein sequence
MTLRLFSPVV LFLLLVFLIG PFLIIIAASL SSGDTLAFPP QGLSLRWVMK VFTVESFRDS 
FAMSMFLAVF GTLTALLLGI PAAYALSRYR LPAAETVRTV VSLPIIVPGI IVGLALLRYL
VVPFGFNITL ALFFAHTALV LPYAVRVVSA SLDNLRSDIE EAAVLLGSSR LGAFFRVVMP
NIRGGILAAF ILGFVTSFNQ VPVSLFLSGP GVRTLPIDML GYMETTYDPS IAALSALLAF
LSIGIVFLAE RFLGFSRYV