Gene M446_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4045 
Symbol 
ID6128947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4512106 
End bp4512930 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content72% 
IMG OID641644200 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770840 
Protein GI170742185 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.329946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCC CGATGTCCCG CCCGCCCGGC GCCCTCGACC GGCTCAGCTT CGAGATCGTG 
GTCGCGCTCC TCGCGGGCGC GGCGCTGATC CTGCTCCTGG CCCCGACCGT GATCGTGCTG
GTCGTGTCCT TCACGGACGG CCTGTCGCTG CGCTTCCCGC CGCCGGGCTA TTCCCTGCGC
TGGTACGGGG AACTCGCCGA GGCGTGGCAG CTGCACTTCG CCCTGCGCAA CAGCCTCACC
GTCGCGGCGG CCGCGACCCT GCTCTCGGTG GGGCTCGGGG TCATGGCCTC GCTCGCCGTG
GCGCGCTCGC CGCGCCTCGC GGCGCGGCTC CTCGACAGCC TGTTCCTCTC GCCCCTCGTC
CTGCCGGCCC TGGCCTTCGG GCTCTCCAGC CTGATGTTCT TCTCGCTCCT CGGCTGGCCG
GTCTCCGTGA CGACGCTGGT GATCGGCCAC ACGGTGGTCT GCGTGCCCTA CGTGGTGCGC
AACACCGTCG CGGCGCTGAC CCAGCTCCAG CCGGTGCTGC TCGAGGGCTC GGCGAGCCTC
GGCGCCTCGC GGCTCTACAC GCTGCGCCGC ATCACCCTGC CGCTGATCCG GCCGGGGGTC
CTGTCGGGCG GCTTCCTCGC CTTCATGGCC TCGTTCGACA ACATCCCGGT CTCCCTGTTC
CTGCGCGACG CGGCGACCGA CATGCTGCCG ATCCGGATGT GGCAGGACCT GGAGGGGCGC
CTCGACGTCA CCATCGCGGC GCTCTCCGGC GTGCTGATCG TCGCCACCAT GGCGGGCATC
GCCGTGATGG AGCGGCTGAC GGGCCTGTCG AAGCGGCTGG CATGA
 
Protein sequence
MSRPMSRPPG ALDRLSFEIV VALLAGAALI LLLAPTVIVL VVSFTDGLSL RFPPPGYSLR 
WYGELAEAWQ LHFALRNSLT VAAAATLLSV GLGVMASLAV ARSPRLAARL LDSLFLSPLV
LPALAFGLSS LMFFSLLGWP VSVTTLVIGH TVVCVPYVVR NTVAALTQLQ PVLLEGSASL
GASRLYTLRR ITLPLIRPGV LSGGFLAFMA SFDNIPVSLF LRDAATDMLP IRMWQDLEGR
LDVTIAALSG VLIVATMAGI AVMERLTGLS KRLA