More than 300 homologs were found in PanDaTox collection
for query gene Mpop_3781 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_3781  binding-protein-dependent transport systems inner membrane component  100 
 
 
177 aa  352  2e-96  Methylobacterium populi BJ001  Bacteria  normal  0.19201  normal  0.101834 
 
 
-
 
NC_009379  Pnuc_1186  binding-protein-dependent transport systems inner membrane component  64.12 
 
 
257 aa  234  7e-61  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.409709  n/a   
 
 
-
 
NC_012917  PC1_3747  binding-protein-dependent transport systems inner membrane component  60.59 
 
 
254 aa  229  2e-59  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0834  binding-protein-dependent transport systems inner membrane component  60 
 
 
264 aa  221  3e-57  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0267  binding-protein-dependent transport systems inner membrane component  60 
 
 
276 aa  208  3e-53  Variovorax paradoxus S110  Bacteria  normal  0.0872978  n/a   
 
 
-
 
NC_007778  RPB_0933  binding-protein dependent transport system inner membrane protein  65.88 
 
 
261 aa  206  2e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3864  binding-protein-dependent transport systems inner membrane component  65.88 
 
 
261 aa  206  2e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  38.96 
 
 
298 aa  112  2.0000000000000002e-24  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
269 aa  107  1e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  35.4 
 
 
263 aa  104  6e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  34.27 
 
 
272 aa  103  9e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  35.93 
 
 
257 aa  103  1e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
287 aa  102  3e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  34.13 
 
 
272 aa  102  4e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
278 aa  101  6e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  34.73 
 
 
290 aa  100  1e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.93 
 
 
273 aa  100  1e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6162  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
262 aa  99.4  2e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.577279 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
273 aa  99  3e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
273 aa  99  3e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
280 aa  98.2  5e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
273 aa  98.2  6e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
256 aa  96.7  2e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
275 aa  96.3  2e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  37.2 
 
 
259 aa  96.7  2e-19  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
281 aa  96.3  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
273 aa  95.9  3e-19  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
298 aa  95.1  4e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
279 aa  95.5  4e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
280 aa  95.1  5e-19  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0287  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
286 aa  94.4  8e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000327752 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
255 aa  92.4  3e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  35.06 
 
 
281 aa  92  4e-18  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  33.92 
 
 
279 aa  88.6  5e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  28.74 
 
 
258 aa  87.8  7e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
289 aa  87.8  8e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  32.57 
 
 
285 aa  87  1e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.13 
 
 
283 aa  86.7  2e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  33.52 
 
 
250 aa  85.9  3e-16  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
267 aa  85.1  4e-16  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
280 aa  85.1  4e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
254 aa  85.1  5e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
279 aa  85.1  5e-16  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
256 aa  85.1  5e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
280 aa  84.3  7e-16  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
279 aa  84.3  8e-16  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  33.55 
 
 
263 aa  84  9e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  31.25 
 
 
279 aa  84  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_008254  Meso_0809  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
277 aa  83.6  0.000000000000001  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.00650739  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
254 aa  83.6  0.000000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
279 aa  83.2  0.000000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
279 aa  83.2  0.000000000000002  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
273 aa  82.8  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  32.47 
 
 
252 aa  82.8  0.000000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
274 aa  83.6  0.000000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
257 aa  82.4  0.000000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  29.94 
 
 
275 aa  82.4  0.000000000000003  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
263 aa  81.6  0.000000000000005  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_009428  Rsph17025_0761  binding-protein-dependent transport systems inner membrane component  30.19 
 
 
412 aa  81.6  0.000000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
263 aa  81.3  0.000000000000006  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
257 aa  81.3  0.000000000000006  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_012854  Rleg_6387  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
283 aa  80.9  0.000000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.199649  normal  0.0607956 
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
276 aa  80.5  0.00000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0352  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
245 aa  80.1  0.00000000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  30.23 
 
 
283 aa  80.1  0.00000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  30.77 
 
 
256 aa  80.5  0.00000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
279 aa  80.9  0.00000000000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  32 
 
 
277 aa  80.5  0.00000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
276 aa  80.5  0.00000000000001  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_011368  Rleg2_4541  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
283 aa  80.5  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.193679 
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  30.59 
 
 
255 aa  80.1  0.00000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  30.23 
 
 
283 aa  80.1  0.00000000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_009720  Xaut_3212  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
271 aa  80.1  0.00000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.896165  normal 
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  30.23 
 
 
253 aa  80.1  0.00000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  30.23 
 
 
253 aa  80.1  0.00000000000002  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
273 aa  79.7  0.00000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  30.06 
 
 
280 aa  80.1  0.00000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  31.74 
 
 
273 aa  79.7  0.00000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1171  taurine ABC transporter permease  31.01 
 
 
272 aa  79.7  0.00000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.104716  n/a   
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
277 aa  80.1  0.00000000000002  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  30.23 
 
 
283 aa  80.1  0.00000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
273 aa  79.7  0.00000000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  29.34 
 
 
255 aa  79.3  0.00000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  30.23 
 
 
285 aa  80.1  0.00000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  33.56 
 
 
263 aa  79.3  0.00000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
263 aa  79  0.00000000000003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
263 aa  79  0.00000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_007908  Rfer_2746  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
283 aa  78.6  0.00000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.89 
 
 
274 aa  78.6  0.00000000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  28.74 
 
 
269 aa  78.2  0.00000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  28.82 
 
 
254 aa  78.6  0.00000000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  29.34 
 
 
274 aa  77.8  0.00000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
268 aa  77.8  0.00000000000007  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  29.63 
 
 
273 aa  77.8  0.00000000000007  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
269 aa  77.8  0.00000000000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  30.3 
 
 
269 aa  77.8  0.00000000000008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
269 aa  77.8  0.00000000000008  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0840  taurine transporter subunit  29.41 
 
 
275 aa  77  0.0000000000001  Enterobacter sp. 638  Bacteria  normal  normal  0.276647 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  31.14 
 
 
271 aa  77  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_007650  BTH_II0802  taurine ABC transporter, permease protein  28.92 
 
 
283 aa  77  0.0000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.207449  n/a   
 
 
-
 
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