Gene Rpic12D_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4149 
Symbol 
ID8021837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp748073 
End bp748903 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID644832929 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002984069 
Protein GI241665710 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCA GCACTAACAC GATGCCTGCC GTGGGCGCGC AGCGCACGGG TCTCGCGCAC 
AAGACCAAGA TCCGCCTGTT CCAGTTGGCC GTAGTGGTGT TGATGTTCGG CTCGTGGGAG
GGCCTTGGCC GTGCGGGCGT GGTCGATCCG TTCTATTTCT CGATGCCGTC GTCGATCGTC
GCGCGCATCT GGGAGTGGTT TACCGCCGGC GACATCTACA CGCATCTGGC CATCACGTTG
GCCGAGACGA TTCTCTCGTT CGGCATCGGC ACGTTGCTCG GCATCAGCCT GGGGCTGTGG
CTCGGCTTGT CCAGGCTCGC GGCCGAGGTG CTGGACCCGT TCATCAAAGT CTTCAACGCG
ATCCCGCGCA TCCTGCTCGC GCCCATCTTC GTGATGTGGT TCGGGCTGGG GCTGACCTCC
AAGGTGGCGT TGGGCGCGAC GATGGTGCTG TTCATCACCT TCTTCAATAC GTACCAGGGT
GTGCGCGAGG TGAACCCCGT CATCCTGGCC AACGCGCGGC TGCTCAAGGC CAGCCGCATC
AGCCTGCTGC GCCATGTGTA TGTGCCGTCG GCTACGAGCT GGATTCTCTC CAGCCTGCGC
GCTTCCGTCG GCATGGCTGT GATGGGCGCA ATCGTGGCGG AGTACCTCGG TTCGTCAGCC
GGCCTGGGCC ACCTGATTGC GCAGGCCGAA GGCGTGTTCG ATGCCACCGG CGTGTTCTCC
GGAATCGTCG TGCTGTCGGC CTTCGTGATT GCGCTGGACC GCAGCGTCGA TGCGCTCGAG
GGCAAGTTGC TGGTGTGGCG CCCGAAGGTT GATCCCGAGA CCAGTGCCTG A
 
Protein sequence
MPSSTNTMPA VGAQRTGLAH KTKIRLFQLA VVVLMFGSWE GLGRAGVVDP FYFSMPSSIV 
ARIWEWFTAG DIYTHLAITL AETILSFGIG TLLGISLGLW LGLSRLAAEV LDPFIKVFNA
IPRILLAPIF VMWFGLGLTS KVALGATMVL FITFFNTYQG VREVNPVILA NARLLKASRI
SLLRHVYVPS ATSWILSSLR ASVGMAVMGA IVAEYLGSSA GLGHLIAQAE GVFDATGVFS
GIVVLSAFVI ALDRSVDALE GKLLVWRPKV DPETSA