Gene Rpic_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1044 
Symbol 
ID6289581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1110265 
End bp1111056 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID642624616 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001898624 
Protein GI187928137 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACC GTCCGCTTTC TCCATTTGCG CTGCGCACCT GGCAGCTTGG CCTGTTGGTC 
GTCACGTTGG GTGTGTGGCA CTTCGCCACG CGCTCGCAGG AAGTCGCGTT CTTCTTTGGG
GAACCGCTGA TCGTTGCCCA GCGCATCTGG GCGTGGTTCG TGACCGAAGG CGATATCTAT
CAGCACCTTG GCGTGACGCT GGCCGAGACG GTGCTGGCAT TTGCCATCGG CACGGCCACC
GGCCTGGGTG CGGGGCTGTG GCTGGCGCTG AGCCCGGCTG CCTCGGCGGT GCTTGATCCG
TACATCAAGG CCGCCAACTC GATGCCGCGC GTGATCCTGG CGCCAATCTT TGGCGTGTGG
TTCGGACTGG GGATCTGGTC AAAGGTCGCG CTGGCGGTGA CGCTGGTGTT CTTCATCGTC
TTCTTCAACG TCTATCAGGG CGTGAAGGAA GTGAGCCCGG TCGTGCTGGC CAATGCACGC
ATGCTGGGCG CATCGCAGCG GCAGCTGCTG CGCTTCGTCT ATCTGCCGAG CGCGACGAGC
TGGGTGTTCT CATCGCTGCA TACGTCAGTG GGCCTGGCCT TCGTCGGGGC GGTGGTGGGC
GAGTACCTGG GCTCCGCGCG CGGTGTCGGT TACTTGATCC TGCAGGCCGA AGGTACGTTC
GACATCAACA CTGTCTTTGC GGGCATCGTC GTGCTGACGG TCTTTGCGCT GGTCCTGGAC
TGGCTCGTGG GCTTGATGGA AAAACGCCTG ATGCGCTGGC AACCGAAGAG CGGCGAGACT
GAAAAGCTCT GA
 
Protein sequence
MANRPLSPFA LRTWQLGLLV VTLGVWHFAT RSQEVAFFFG EPLIVAQRIW AWFVTEGDIY 
QHLGVTLAET VLAFAIGTAT GLGAGLWLAL SPAASAVLDP YIKAANSMPR VILAPIFGVW
FGLGIWSKVA LAVTLVFFIV FFNVYQGVKE VSPVVLANAR MLGASQRQLL RFVYLPSATS
WVFSSLHTSV GLAFVGAVVG EYLGSARGVG YLILQAEGTF DINTVFAGIV VLTVFALVLD
WLVGLMEKRL MRWQPKSGET EKL