More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2746 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2746  binding-protein-dependent transport systems inner membrane component  100 
 
 
283 aa  555  1e-157  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  75.79 
 
 
279 aa  418  1e-116  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  73.84 
 
 
263 aa  395  1e-109  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  74.19 
 
 
263 aa  395  1e-109  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  74.55 
 
 
263 aa  396  1e-109  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  70.41 
 
 
274 aa  396  1e-109  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  72.5 
 
 
277 aa  395  1e-109  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  69.73 
 
 
274 aa  390  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  74.91 
 
 
263 aa  394  1e-108  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_010681  Bphyt_1832  binding-protein-dependent transport systems inner membrane component  69.05 
 
 
274 aa  387  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.146122 
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  77.43 
 
 
263 aa  380  1e-104  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_008688  Pden_4882  binding-protein-dependent transport systems inner membrane component  55.19 
 
 
259 aa  273  2.0000000000000002e-72  Paracoccus denitrificans PD1222  Bacteria  normal  0.947992  normal 
 
 
-
 
NC_010511  M446_1432  binding-protein-dependent transport systems inner membrane component  54.89 
 
 
260 aa  273  2.0000000000000002e-72  Methylobacterium sp. 4-46  Bacteria  normal  0.324199  normal  0.863766 
 
 
-
 
NC_011894  Mnod_2256  binding-protein-dependent transport systems inner membrane component  61.87 
 
 
268 aa  271  9e-72  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3278  ABC transporter related protein  57.14 
 
 
257 aa  270  1e-71  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.000407876  normal  0.0335836 
 
 
-
 
NC_011894  Mnod_1056  binding-protein-dependent transport systems inner membrane component  54.51 
 
 
266 aa  269  5e-71  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  50.94 
 
 
276 aa  268  8.999999999999999e-71  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  50.94 
 
 
276 aa  268  8.999999999999999e-71  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3590  binding-protein-dependent transport systems inner membrane component  57.37 
 
 
262 aa  260  1e-68  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3212  binding-protein-dependent transport systems inner membrane component  56.49 
 
 
271 aa  259  4e-68  Xanthobacter autotrophicus Py2  Bacteria  normal  0.896165  normal 
 
 
-
 
NC_004311  BRA0285  ABC transporter, permease protein  56.97 
 
 
263 aa  259  5.0000000000000005e-68  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0261  ABC transporter, permease protein  56.97 
 
 
263 aa  258  7e-68  Brucella ovis ATCC 25840  Bacteria  normal  0.597346  n/a   
 
 
-
 
NC_009485  BBta_6067  ABC transporter permease  54.89 
 
 
261 aa  256  4e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2254  binding-protein-dependent transport systems inner membrane component  54.29 
 
 
264 aa  244  9.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.440017  n/a   
 
 
-
 
NC_007778  RPB_3334  binding-protein dependent transport system inner membrane protein  56.43 
 
 
265 aa  230  2e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.227064  normal  0.190195 
 
 
-
 
NC_007958  RPD_2107  binding-protein-dependent transport systems inner membrane component  52.77 
 
 
265 aa  230  2e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.970819 
 
 
-
 
NC_011368  Rleg2_5341  binding-protein-dependent transport systems inner membrane component  42.24 
 
 
293 aa  202  6e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.7364 
 
 
-
 
NC_012848  Rleg_5061  binding-protein-dependent transport systems inner membrane component  41.16 
 
 
293 aa  199  3e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.877762  normal  0.739003 
 
 
-
 
NC_011989  Avi_3330  ABC transporter membrane spanning protein  40.22 
 
 
295 aa  199  5e-50  Agrobacterium vitis S4  Bacteria  normal  0.730487  n/a   
 
 
-
 
NC_009668  Oant_3514  binding-protein-dependent transport systems inner membrane component  42.5 
 
 
295 aa  184  1.0000000000000001e-45  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_009720  Xaut_1531  binding-protein-dependent transport systems inner membrane component  43.7 
 
 
295 aa  183  3e-45  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3961  binding-protein-dependent transport systems inner membrane component  40.73 
 
 
287 aa  179  4.999999999999999e-44  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3114  binding-protein-dependent transport systems inner membrane component  40.96 
 
 
294 aa  177  1e-43  Rhodoferax ferrireducens T118  Bacteria  normal  0.0684117  n/a   
 
 
-
 
NC_007952  Bxe_B0493  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  42.92 
 
 
287 aa  177  1e-43  Burkholderia xenovorans LB400  Bacteria  normal  0.114665  normal 
 
 
-
 
NC_013131  Caci_5602  binding-protein-dependent transport systems inner membrane component  39.7 
 
 
302 aa  177  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.033554  normal  0.953446 
 
 
-
 
NC_010676  Bphyt_4033  binding-protein-dependent transport systems inner membrane component  42.92 
 
 
287 aa  177  2e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  0.753159  normal 
 
 
-
 
NC_008060  Bcen_0038  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
285 aa  174  9.999999999999999e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.090458  n/a   
 
 
-
 
NC_010508  Bcenmc03_0051  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
282 aa  174  9.999999999999999e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0032  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
285 aa  174  9.999999999999999e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0034  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
285 aa  173  2.9999999999999996e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0037  ABC transporter, permease protein  41.67 
 
 
259 aa  173  2.9999999999999996e-42  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0033  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
282 aa  173  2.9999999999999996e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  0.589022  normal 
 
 
-
 
NC_008390  Bamb_0024  binding-protein-dependent transport systems inner membrane component  41.25 
 
 
285 aa  172  5e-42  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2678  ABC transporter, permease protein  41.25 
 
 
285 aa  172  5.999999999999999e-42  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3216  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  41.25 
 
 
285 aa  172  5.999999999999999e-42  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_2699  ABC transporter, permease protein  41.25 
 
 
282 aa  172  6.999999999999999e-42  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0253  ABC transporter, permease protein  41.25 
 
 
282 aa  172  6.999999999999999e-42  Burkholderia pseudomallei 1710b  Bacteria  normal  0.735185  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3274  ABC transporter, permease protein  41.25 
 
 
282 aa  172  6.999999999999999e-42  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1853  ABC transporter, permease protein  41.25 
 
 
282 aa  172  6.999999999999999e-42  Burkholderia mallei NCTC 10229  Bacteria  normal  0.989072  n/a   
 
 
-
 
NC_009074  BURPS668_0040  ABC transporter, permease protein  41.25 
 
 
282 aa  172  6.999999999999999e-42  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0040  ABC transporter, permease protein  41.25 
 
 
282 aa  172  6.999999999999999e-42  Burkholderia pseudomallei 1106a  Bacteria  normal  0.522623  n/a   
 
 
-
 
NC_011004  Rpal_0950  binding-protein-dependent transport systems inner membrane component  42.08 
 
 
283 aa  166  4e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.616045  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  37.71 
 
 
329 aa  149  4e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2962  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
280 aa  144  1e-33  Chelativorans sp. BNC1  Bacteria  normal  0.0794658  n/a   
 
 
-
 
NC_013525  Tter_0231  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
271 aa  142  9e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011059  Paes_0622  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
257 aa  141  9.999999999999999e-33  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
292 aa  135  8e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
249 aa  132  5e-30  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
271 aa  131  1.0000000000000001e-29  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  38.62 
 
 
254 aa  128  1.0000000000000001e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  38.62 
 
 
257 aa  127  2.0000000000000002e-28  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008146  Mmcs_2524  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
279 aa  124  2e-27  Mycobacterium sp. MCS  Bacteria  normal  0.667278  n/a   
 
 
-
 
NC_008705  Mkms_2569  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
279 aa  124  2e-27  Mycobacterium sp. KMS  Bacteria  normal  0.568124  normal 
 
 
-
 
NC_012793  GWCH70_2784  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
269 aa  124  3e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1834  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
268 aa  124  3e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.101401  n/a   
 
 
-
 
NC_010320  Teth514_2295  binding-protein-dependent transport systems inner membrane component  26.37 
 
 
272 aa  122  5e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2561  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
279 aa  121  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  30.39 
 
 
281 aa  119  7e-26  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_013411  GYMC61_0589  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
269 aa  118  9.999999999999999e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_2574  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
270 aa  118  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  35.64 
 
 
279 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  34.47 
 
 
261 aa  116  3.9999999999999997e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  29.8 
 
 
290 aa  115  6e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
280 aa  115  6e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
283 aa  115  6.9999999999999995e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_007333  Tfu_1306  ABC transporter, permease component  36.59 
 
 
286 aa  114  2.0000000000000002e-24  Thermobifida fusca YX  Bacteria  normal  0.334764  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
273 aa  114  2.0000000000000002e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
281 aa  113  4.0000000000000004e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4556  binding-protein-dependent transport systems inner membrane component  28.41 
 
 
267 aa  113  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  26.94 
 
 
278 aa  112  6e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  31.22 
 
 
282 aa  110  2.0000000000000002e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  31.22 
 
 
282 aa  110  2.0000000000000002e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
257 aa  110  3e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  33.33 
 
 
282 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
243 aa  110  3e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  28.17 
 
 
250 aa  109  5e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
255 aa  109  5e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
258 aa  109  6e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
273 aa  109  6e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  25 
 
 
264 aa  109  6e-23  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  34.52 
 
 
266 aa  109  6e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
273 aa  109  6e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
254 aa  108  7.000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_011898  Ccel_0879  binding-protein-dependent transport systems inner membrane component  29.26 
 
 
274 aa  108  9.000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00112224  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  29.96 
 
 
258 aa  108  1e-22  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  34.01 
 
 
266 aa  108  1e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
267 aa  108  1e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  27.78 
 
 
250 aa  107  2e-22  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  31.5 
 
 
258 aa  107  2e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  31.19 
 
 
256 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
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