More than 300 homologs were found in PanDaTox collection
for query gene Dred_1834 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_1834  binding-protein-dependent transport systems inner membrane component  100 
 
 
268 aa  531  1e-150  Desulfotomaculum reducens MI-1  Bacteria  normal  0.101401  n/a   
 
 
-
 
NC_010320  Teth514_2295  binding-protein-dependent transport systems inner membrane component  61.45 
 
 
272 aa  336  1.9999999999999998e-91  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4556  binding-protein-dependent transport systems inner membrane component  63.6 
 
 
267 aa  337  1.9999999999999998e-91  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0879  binding-protein-dependent transport systems inner membrane component  61.54 
 
 
274 aa  317  1e-85  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00112224  n/a   
 
 
-
 
NC_009012  Cthe_2574  binding-protein-dependent transport systems inner membrane component  61.98 
 
 
270 aa  314  9e-85  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  53.26 
 
 
278 aa  274  8e-73  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_010001  Cphy_0802  binding-protein-dependent transport systems inner membrane component  47.71 
 
 
274 aa  256  2e-67  Clostridium phytofermentans ISDg  Bacteria  normal  0.240571  n/a   
 
 
-
 
NC_012793  GWCH70_2784  binding-protein-dependent transport systems inner membrane component  47.66 
 
 
269 aa  233  3e-60  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0589  binding-protein-dependent transport systems inner membrane component  47.35 
 
 
269 aa  229  5e-59  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_3456  binding-protein-dependent transport systems inner membrane component  50.19 
 
 
268 aa  223  2e-57  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.133558  n/a   
 
 
-
 
NC_011773  BCAH820_4902  ABC transporter, permease protein  50.38 
 
 
268 aa  211  1e-53  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS4677  ABC transporter permease  50.38 
 
 
268 aa  211  1e-53  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4536  ABC transporter, permease  50.38 
 
 
268 aa  211  1e-53  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5038  ABC transporter permease  50.38 
 
 
268 aa  211  1e-53  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0335  ABC transporter, permease protein  50 
 
 
268 aa  209  4e-53  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4923  ABC transporter, permease protein  50.38 
 
 
268 aa  209  5e-53  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4517  ABC transporter, permease  50.38 
 
 
268 aa  209  5e-53  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4903  ABC transporter, permease protein  50 
 
 
268 aa  208  7e-53  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4937  ABC transporter, permease protein  50.38 
 
 
268 aa  207  2e-52  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4615  binding-protein-dependent transport systems inner membrane component  49.62 
 
 
268 aa  203  3e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  35.83 
 
 
292 aa  177  1e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
271 aa  161  1e-38  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3330  ABC transporter membrane spanning protein  33.08 
 
 
295 aa  145  9e-34  Agrobacterium vitis S4  Bacteria  normal  0.730487  n/a   
 
 
-
 
NC_011368  Rleg2_5341  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
293 aa  143  3e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.7364 
 
 
-
 
NC_010623  Bphy_3961  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
287 aa  143  3e-33  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5061  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
293 aa  142  4e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.877762  normal  0.739003 
 
 
-
 
NC_007651  BTH_I0037  ABC transporter, permease protein  34.12 
 
 
259 aa  140  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0493  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.09 
 
 
287 aa  139  3.9999999999999997e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.114665  normal 
 
 
-
 
NC_009720  Xaut_1531  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
295 aa  139  3.9999999999999997e-32  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4033  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
287 aa  138  7e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.753159  normal 
 
 
-
 
NC_009076  BURPS1106A_0040  ABC transporter, permease protein  34.84 
 
 
282 aa  137  2e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  0.522623  n/a   
 
 
-
 
NC_009074  BURPS668_0040  ABC transporter, permease protein  34.84 
 
 
282 aa  137  2e-31  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2699  ABC transporter, permease protein  34.84 
 
 
282 aa  137  2e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2678  ABC transporter, permease protein  34.84 
 
 
285 aa  137  2e-31  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0253  ABC transporter, permease protein  34.84 
 
 
282 aa  137  2e-31  Burkholderia pseudomallei 1710b  Bacteria  normal  0.735185  n/a   
 
 
-
 
NC_009668  Oant_3514  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
295 aa  137  2e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3274  ABC transporter, permease protein  34.84 
 
 
282 aa  137  2e-31  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1853  ABC transporter, permease protein  34.84 
 
 
282 aa  137  2e-31  Burkholderia mallei NCTC 10229  Bacteria  normal  0.989072  n/a   
 
 
-
 
NC_010551  BamMC406_0033  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
282 aa  134  9.999999999999999e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.589022  normal 
 
 
-
 
NC_007510  Bcep18194_A3216  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  34.54 
 
 
285 aa  134  9.999999999999999e-31  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0024  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
285 aa  134  9.999999999999999e-31  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0034  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
285 aa  134  1.9999999999999998e-30  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0622  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
257 aa  133  3e-30  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  32.33 
 
 
261 aa  131  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_010625  Bphy_6300  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
272 aa  131  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
254 aa  131  1.0000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_008060  Bcen_0038  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
285 aa  131  1.0000000000000001e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.090458  n/a   
 
 
-
 
NC_008542  Bcen2424_0032  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
285 aa  131  1.0000000000000001e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0051  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
282 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
274 aa  130  2.0000000000000002e-29  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
281 aa  130  3e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  30.64 
 
 
256 aa  129  7.000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
257 aa  129  7.000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
270 aa  128  1.0000000000000001e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0231  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
271 aa  125  8.000000000000001e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
276 aa  125  8.000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
276 aa  125  8.000000000000001e-28  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  30.92 
 
 
259 aa  124  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_011004  Rpal_0950  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
283 aa  124  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.616045  n/a   
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
263 aa  124  1e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
246 aa  124  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_3114  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
294 aa  124  2e-27  Rhodoferax ferrireducens T118  Bacteria  normal  0.0684117  n/a   
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  29.28 
 
 
274 aa  123  3e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
265 aa  122  5e-27  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  33.17 
 
 
263 aa  122  5e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
329 aa  122  7e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  30.31 
 
 
263 aa  122  7e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
274 aa  122  7e-27  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_010681  Bphyt_1832  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
274 aa  121  9.999999999999999e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.146122 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
263 aa  120  3e-26  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
263 aa  120  3e-26  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  28.95 
 
 
259 aa  119  7e-26  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
279 aa  117  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
260 aa  116  3.9999999999999997e-25  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_012917  PC1_1402  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
257 aa  115  5e-25  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  23.79 
 
 
263 aa  115  5e-25  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2962  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
280 aa  115  6.9999999999999995e-25  Chelativorans sp. BNC1  Bacteria  normal  0.0794658  n/a   
 
 
-
 
NC_007511  Bcep18194_B2062  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.76 
 
 
280 aa  114  1.0000000000000001e-24  Burkholderia sp. 383  Bacteria  normal  0.332807  normal  0.624531 
 
 
-
 
NC_014213  Mesil_3278  ABC transporter related protein  31.3 
 
 
257 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.000407876  normal  0.0335836 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  29.24 
 
 
251 aa  114  2.0000000000000002e-24  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  29.66 
 
 
255 aa  114  2.0000000000000002e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7221  ABC transporter membrane spanning protein (nitrate/sulfonates)  28.57 
 
 
282 aa  114  2.0000000000000002e-24  Agrobacterium vitis S4  Bacteria  normal  0.735165  n/a   
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
277 aa  114  2.0000000000000002e-24  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
255 aa  113  3e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_010625  Bphy_7235  binding-protein-dependent transport systems inner membrane component  29.02 
 
 
285 aa  113  4.0000000000000004e-24  Burkholderia phymatum STM815  Bacteria  normal  0.266674  normal 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  24.26 
 
 
264 aa  113  4.0000000000000004e-24  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_008061  Bcen_4345  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
280 aa  112  4.0000000000000004e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.821403  n/a   
 
 
-
 
NC_008543  Bcen2424_4021  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
280 aa  112  4.0000000000000004e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
249 aa  112  6e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_007908  Rfer_2746  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
283 aa  112  7.000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
254 aa  112  8.000000000000001e-24  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  27.84 
 
 
287 aa  112  9e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  25.5 
 
 
264 aa  112  9e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  28.41 
 
 
281 aa  111  1.0000000000000001e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0133  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.4 
 
 
283 aa  111  1.0000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.744619  normal 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
282 aa  111  1.0000000000000001e-23  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  25.37 
 
 
263 aa  111  1.0000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_009720  Xaut_3212  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
271 aa  111  1.0000000000000001e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  0.896165  normal 
 
 
-
 
NC_013421  Pecwa_1800  binding-protein-dependent transport systems inner membrane component  25.94 
 
 
257 aa  110  2.0000000000000002e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1091  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
258 aa  110  2.0000000000000002e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0347556  normal 
 
 
-
 
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