More than 300 homologs were found in PanDaTox collection
for query gene Mnod_2256 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_2256  binding-protein-dependent transport systems inner membrane component  100 
 
 
268 aa  516  1.0000000000000001e-145  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  64.55 
 
 
274 aa  327  1.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  65.37 
 
 
263 aa  322  3e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  68.09 
 
 
263 aa  322  5e-87  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  63.26 
 
 
274 aa  321  9.000000000000001e-87  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_010681  Bphyt_1832  binding-protein-dependent transport systems inner membrane component  62.88 
 
 
274 aa  318  7e-86  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.146122 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  70.98 
 
 
263 aa  316  2e-85  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  70.98 
 
 
263 aa  316  3e-85  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  69.2 
 
 
263 aa  313  9.999999999999999e-85  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  60.58 
 
 
277 aa  311  4.999999999999999e-84  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  60.52 
 
 
279 aa  306  3e-82  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2746  binding-protein-dependent transport systems inner membrane component  61.81 
 
 
283 aa  298  8e-80  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4882  binding-protein-dependent transport systems inner membrane component  55.51 
 
 
259 aa  271  1e-71  Paracoccus denitrificans PD1222  Bacteria  normal  0.947992  normal 
 
 
-
 
NC_009720  Xaut_3212  binding-protein-dependent transport systems inner membrane component  60.09 
 
 
271 aa  263  2e-69  Xanthobacter autotrophicus Py2  Bacteria  normal  0.896165  normal 
 
 
-
 
NC_009668  Oant_3590  binding-protein-dependent transport systems inner membrane component  60 
 
 
262 aa  263  3e-69  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6067  ABC transporter permease  60.18 
 
 
261 aa  262  4.999999999999999e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0261  ABC transporter, permease protein  58.27 
 
 
263 aa  261  8e-69  Brucella ovis ATCC 25840  Bacteria  normal  0.597346  n/a   
 
 
-
 
NC_004311  BRA0285  ABC transporter, permease protein  57.87 
 
 
263 aa  259  3e-68  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  54.87 
 
 
276 aa  259  3e-68  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  54.87 
 
 
276 aa  259  3e-68  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_010511  M446_1432  binding-protein-dependent transport systems inner membrane component  61.47 
 
 
260 aa  259  4e-68  Methylobacterium sp. 4-46  Bacteria  normal  0.324199  normal  0.863766 
 
 
-
 
NC_011894  Mnod_1056  binding-protein-dependent transport systems inner membrane component  54.47 
 
 
266 aa  256  2e-67  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_011004  Rpal_2254  binding-protein-dependent transport systems inner membrane component  59.64 
 
 
264 aa  255  4e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.440017  n/a   
 
 
-
 
NC_014213  Mesil_3278  ABC transporter related protein  57.2 
 
 
257 aa  252  6e-66  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.000407876  normal  0.0335836 
 
 
-
 
NC_007778  RPB_3334  binding-protein dependent transport system inner membrane protein  59.31 
 
 
265 aa  241  7e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.227064  normal  0.190195 
 
 
-
 
NC_007958  RPD_2107  binding-protein-dependent transport systems inner membrane component  58.01 
 
 
265 aa  236  2e-61  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.970819 
 
 
-
 
NC_009668  Oant_3514  binding-protein-dependent transport systems inner membrane component  47.27 
 
 
295 aa  202  4e-51  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_012848  Rleg_5061  binding-protein-dependent transport systems inner membrane component  42.13 
 
 
293 aa  199  3.9999999999999996e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.877762  normal  0.739003 
 
 
-
 
NC_011368  Rleg2_5341  binding-protein-dependent transport systems inner membrane component  42.52 
 
 
293 aa  198  9e-50  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.7364 
 
 
-
 
NC_009720  Xaut_1531  binding-protein-dependent transport systems inner membrane component  45.06 
 
 
295 aa  197  2.0000000000000003e-49  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3330  ABC transporter membrane spanning protein  39.61 
 
 
295 aa  195  5.000000000000001e-49  Agrobacterium vitis S4  Bacteria  normal  0.730487  n/a   
 
 
-
 
NC_013131  Caci_5602  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
302 aa  188  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.033554  normal  0.953446 
 
 
-
 
NC_010676  Bphyt_4033  binding-protein-dependent transport systems inner membrane component  44.14 
 
 
287 aa  183  3e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  0.753159  normal 
 
 
-
 
NC_007651  BTH_I0037  ABC transporter, permease protein  43.36 
 
 
259 aa  182  6e-45  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0493  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  43.75 
 
 
287 aa  182  7e-45  Burkholderia xenovorans LB400  Bacteria  normal  0.114665  normal 
 
 
-
 
NC_010623  Bphy_3961  binding-protein-dependent transport systems inner membrane component  43.8 
 
 
287 aa  179  4.999999999999999e-44  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3114  binding-protein-dependent transport systems inner membrane component  44.58 
 
 
294 aa  178  8e-44  Rhodoferax ferrireducens T118  Bacteria  normal  0.0684117  n/a   
 
 
-
 
NC_010508  Bcenmc03_0051  binding-protein-dependent transport systems inner membrane component  43.9 
 
 
282 aa  177  2e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0040  ABC transporter, permease protein  43.55 
 
 
282 aa  177  2e-43  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2678  ABC transporter, permease protein  43.55 
 
 
285 aa  177  2e-43  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0253  ABC transporter, permease protein  43.55 
 
 
282 aa  177  2e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  0.735185  n/a   
 
 
-
 
NC_007510  Bcep18194_A3216  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  44.72 
 
 
285 aa  177  2e-43  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0033  binding-protein-dependent transport systems inner membrane component  43.92 
 
 
282 aa  177  2e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  0.589022  normal 
 
 
-
 
NC_008060  Bcen_0038  binding-protein-dependent transport systems inner membrane component  43.9 
 
 
285 aa  176  2e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.090458  n/a   
 
 
-
 
NC_009076  BURPS1106A_0040  ABC transporter, permease protein  43.55 
 
 
282 aa  177  2e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  0.522623  n/a   
 
 
-
 
NC_008390  Bamb_0024  binding-protein-dependent transport systems inner membrane component  43.92 
 
 
285 aa  177  2e-43  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0032  binding-protein-dependent transport systems inner membrane component  43.9 
 
 
285 aa  176  2e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2699  ABC transporter, permease protein  43.55 
 
 
282 aa  177  2e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3274  ABC transporter, permease protein  43.55 
 
 
282 aa  177  2e-43  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1853  ABC transporter, permease protein  43.55 
 
 
282 aa  177  2e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  0.989072  n/a   
 
 
-
 
NC_010084  Bmul_0034  binding-protein-dependent transport systems inner membrane component  43.53 
 
 
285 aa  176  5e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0950  binding-protein-dependent transport systems inner membrane component  44.3 
 
 
283 aa  166  2.9999999999999998e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.616045  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  37.84 
 
 
329 aa  158  8e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0231  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
271 aa  148  8e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_2962  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
280 aa  148  1.0000000000000001e-34  Chelativorans sp. BNC1  Bacteria  normal  0.0794658  n/a   
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
271 aa  138  7.999999999999999e-32  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0622  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
257 aa  138  1e-31  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
292 aa  136  3.0000000000000003e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2295  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
272 aa  136  4e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2561  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
279 aa  128  9.000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2524  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
279 aa  128  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  0.667278  n/a   
 
 
-
 
NC_008705  Mkms_2569  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
279 aa  128  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  0.568124  normal 
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  31 
 
 
278 aa  122  8e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
249 aa  122  9e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
281 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1306  ABC transporter, permease component  35.53 
 
 
286 aa  120  3e-26  Thermobifida fusca YX  Bacteria  normal  0.334764  n/a   
 
 
-
 
NC_009253  Dred_1834  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
268 aa  119  3.9999999999999996e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  0.101401  n/a   
 
 
-
 
NC_010001  Cphy_0802  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
274 aa  119  4.9999999999999996e-26  Clostridium phytofermentans ISDg  Bacteria  normal  0.240571  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
281 aa  118  9.999999999999999e-26  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009012  Cthe_2574  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
270 aa  117  1.9999999999999998e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2784  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
269 aa  117  1.9999999999999998e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
280 aa  117  1.9999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
273 aa  117  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
273 aa  117  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  34.11 
 
 
266 aa  116  3e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_21600  aliphatic sulfonates ABC transporter, inner membrane component  31.56 
 
 
284 aa  116  3.9999999999999997e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  32.16 
 
 
282 aa  116  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  34.5 
 
 
266 aa  115  5e-25  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  31.37 
 
 
279 aa  116  5e-25  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_011898  Ccel_0879  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
274 aa  116  5e-25  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00112224  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  33.48 
 
 
279 aa  115  7.999999999999999e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3923  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
289 aa  115  8.999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.276752  normal  0.204471 
 
 
-
 
NC_007005  Psyr_3598  binding-protein dependent transport system inner membrane protein  31.84 
 
 
285 aa  115  8.999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.330128 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  30.09 
 
 
290 aa  114  1.0000000000000001e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
245 aa  115  1.0000000000000001e-24  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
273 aa  114  2.0000000000000002e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
253 aa  114  2.0000000000000002e-24  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_013411  GYMC61_0589  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
269 aa  113  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
273 aa  113  3e-24  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  30.4 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  31.92 
 
 
250 aa  111  1.0000000000000001e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
273 aa  111  1.0000000000000001e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
251 aa  111  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
258 aa  111  1.0000000000000001e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  31.92 
 
 
251 aa  110  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_004578  PSPTO_1796  sulfonate ABC transporter, permease protein, putative  30.94 
 
 
285 aa  110  2.0000000000000002e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
257 aa  110  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
250 aa  110  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
267 aa  111  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
265 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
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