More than 300 homologs were found in PanDaTox collection
for query gene Caci_5602 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_5602  binding-protein-dependent transport systems inner membrane component  100 
 
 
302 aa  601  1.0000000000000001e-171  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.033554  normal  0.953446 
 
 
-
 
NC_009668  Oant_3514  binding-protein-dependent transport systems inner membrane component  51.19 
 
 
295 aa  274  1.0000000000000001e-72  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_009720  Xaut_1531  binding-protein-dependent transport systems inner membrane component  51.48 
 
 
295 aa  258  7e-68  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0037  ABC transporter, permease protein  52.94 
 
 
259 aa  258  1e-67  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5061  binding-protein-dependent transport systems inner membrane component  47.23 
 
 
293 aa  256  2e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.877762  normal  0.739003 
 
 
-
 
NC_011368  Rleg2_5341  binding-protein-dependent transport systems inner membrane component  43.96 
 
 
293 aa  255  5e-67  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.7364 
 
 
-
 
NC_008060  Bcen_0038  binding-protein-dependent transport systems inner membrane component  48.81 
 
 
285 aa  255  8e-67  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.090458  n/a   
 
 
-
 
NC_008542  Bcen2424_0032  binding-protein-dependent transport systems inner membrane component  48.81 
 
 
285 aa  255  8e-67  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3961  binding-protein-dependent transport systems inner membrane component  50 
 
 
287 aa  254  1.0000000000000001e-66  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0051  binding-protein-dependent transport systems inner membrane component  51.82 
 
 
282 aa  253  2.0000000000000002e-66  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0950  binding-protein-dependent transport systems inner membrane component  54.1 
 
 
283 aa  251  9.000000000000001e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.616045  n/a   
 
 
-
 
NC_006348  BMA2678  ABC transporter, permease protein  49.47 
 
 
285 aa  249  3e-65  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0253  ABC transporter, permease protein  52.21 
 
 
282 aa  249  4e-65  Burkholderia pseudomallei 1710b  Bacteria  normal  0.735185  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3274  ABC transporter, permease protein  52.21 
 
 
282 aa  249  4e-65  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1853  ABC transporter, permease protein  52.21 
 
 
282 aa  249  4e-65  Burkholderia mallei NCTC 10229  Bacteria  normal  0.989072  n/a   
 
 
-
 
NC_009074  BURPS668_0040  ABC transporter, permease protein  52.21 
 
 
282 aa  249  4e-65  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0040  ABC transporter, permease protein  52.21 
 
 
282 aa  249  4e-65  Burkholderia pseudomallei 1106a  Bacteria  normal  0.522623  n/a   
 
 
-
 
NC_009080  BMA10247_2699  ABC transporter, permease protein  52.21 
 
 
282 aa  249  4e-65  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0034  binding-protein-dependent transport systems inner membrane component  52.24 
 
 
285 aa  248  8e-65  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3330  ABC transporter membrane spanning protein  44.73 
 
 
295 aa  247  2e-64  Agrobacterium vitis S4  Bacteria  normal  0.730487  n/a   
 
 
-
 
NC_010551  BamMC406_0033  binding-protein-dependent transport systems inner membrane component  52.24 
 
 
282 aa  245  4.9999999999999997e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.589022  normal 
 
 
-
 
NC_008390  Bamb_0024  binding-protein-dependent transport systems inner membrane component  51.84 
 
 
285 aa  245  4.9999999999999997e-64  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3216  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  51.43 
 
 
285 aa  245  6e-64  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0493  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  50.19 
 
 
287 aa  244  9.999999999999999e-64  Burkholderia xenovorans LB400  Bacteria  normal  0.114665  normal 
 
 
-
 
NC_010676  Bphyt_4033  binding-protein-dependent transport systems inner membrane component  50.19 
 
 
287 aa  244  1.9999999999999999e-63  Burkholderia phytofirmans PsJN  Bacteria  normal  0.753159  normal 
 
 
-
 
NC_007908  Rfer_3114  binding-protein-dependent transport systems inner membrane component  48.08 
 
 
294 aa  230  2e-59  Rhodoferax ferrireducens T118  Bacteria  normal  0.0684117  n/a   
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  46.4 
 
 
276 aa  227  2e-58  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  46.4 
 
 
276 aa  227  2e-58  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3278  ABC transporter related protein  48.32 
 
 
257 aa  206  5e-52  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.000407876  normal  0.0335836 
 
 
-
 
NC_008688  Pden_4882  binding-protein-dependent transport systems inner membrane component  46.88 
 
 
259 aa  201  8e-51  Paracoccus denitrificans PD1222  Bacteria  normal  0.947992  normal 
 
 
-
 
NC_009720  Xaut_3212  binding-protein-dependent transport systems inner membrane component  45.58 
 
 
271 aa  198  9e-50  Xanthobacter autotrophicus Py2  Bacteria  normal  0.896165  normal 
 
 
-
 
NC_011894  Mnod_1056  binding-protein-dependent transport systems inner membrane component  46.64 
 
 
266 aa  196  4.0000000000000005e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_010511  M446_1432  binding-protein-dependent transport systems inner membrane component  46.64 
 
 
260 aa  193  3e-48  Methylobacterium sp. 4-46  Bacteria  normal  0.324199  normal  0.863766 
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  43.05 
 
 
274 aa  192  7e-48  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  44.2 
 
 
263 aa  191  9e-48  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  44.84 
 
 
263 aa  190  2.9999999999999997e-47  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  44.03 
 
 
263 aa  190  2.9999999999999997e-47  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  44.03 
 
 
263 aa  189  4e-47  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_010681  Bphyt_1832  binding-protein-dependent transport systems inner membrane component  43.05 
 
 
274 aa  189  4e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.146122 
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  42.6 
 
 
274 aa  189  5e-47  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  45.29 
 
 
263 aa  189  5.999999999999999e-47  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_009668  Oant_3590  binding-protein-dependent transport systems inner membrane component  45.17 
 
 
262 aa  188  1e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2254  binding-protein-dependent transport systems inner membrane component  45.58 
 
 
264 aa  186  3e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.440017  n/a   
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  39.85 
 
 
279 aa  184  1.0000000000000001e-45  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0261  ABC transporter, permease protein  43.56 
 
 
263 aa  184  2.0000000000000003e-45  Brucella ovis ATCC 25840  Bacteria  normal  0.597346  n/a   
 
 
-
 
NC_004311  BRA0285  ABC transporter, permease protein  42.8 
 
 
263 aa  181  1e-44  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
329 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
277 aa  180  2.9999999999999997e-44  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_007908  Rfer_2746  binding-protein-dependent transport systems inner membrane component  41.42 
 
 
283 aa  176  6e-43  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6067  ABC transporter permease  44.69 
 
 
261 aa  174  1.9999999999999998e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2256  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
268 aa  167  2.9999999999999998e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2107  binding-protein-dependent transport systems inner membrane component  44.18 
 
 
265 aa  166  2.9999999999999998e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.970819 
 
 
-
 
NC_007778  RPB_3334  binding-protein dependent transport system inner membrane protein  43.33 
 
 
265 aa  158  1e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.227064  normal  0.190195 
 
 
-
 
NC_008254  Meso_2962  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
280 aa  158  1e-37  Chelativorans sp. BNC1  Bacteria  normal  0.0794658  n/a   
 
 
-
 
NC_009077  Mjls_2561  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
279 aa  157  2e-37  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2524  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
279 aa  155  6e-37  Mycobacterium sp. MCS  Bacteria  normal  0.667278  n/a   
 
 
-
 
NC_008705  Mkms_2569  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
279 aa  155  6e-37  Mycobacterium sp. KMS  Bacteria  normal  0.568124  normal 
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
292 aa  149  8e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0231  binding-protein-dependent transport systems inner membrane component  29.64 
 
 
271 aa  142  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
281 aa  141  1.9999999999999998e-32  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  32.14 
 
 
282 aa  136  5e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_013131  Caci_3923  binding-protein-dependent transport systems inner membrane component  28.87 
 
 
289 aa  132  9e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.276752  normal  0.204471 
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
271 aa  130  2.0000000000000002e-29  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
280 aa  129  9.000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
273 aa  127  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1306  ABC transporter, permease component  34.73 
 
 
286 aa  127  2.0000000000000002e-28  Thermobifida fusca YX  Bacteria  normal  0.334764  n/a   
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
273 aa  125  7e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5005  binding-protein-dependent transport systems inner membrane component  29.21 
 
 
289 aa  125  8.000000000000001e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  32.78 
 
 
277 aa  125  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
257 aa  124  2e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
281 aa  123  4e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
279 aa  123  4e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
NC_010184  BcerKBAB4_4615  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
268 aa  123  5e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2295  binding-protein-dependent transport systems inner membrane component  27.31 
 
 
272 aa  122  7e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  32.29 
 
 
261 aa  122  7e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  28.24 
 
 
278 aa  122  7e-27  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  28.86 
 
 
278 aa  122  9e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  31.72 
 
 
286 aa  120  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_009921  Franean1_3872  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
308 aa  121  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0743241  normal  0.0892137 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
277 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
283 aa  118  9.999999999999999e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
275 aa  118  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
273 aa  118  9.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_4517  ABC transporter, permease  30.87 
 
 
268 aa  118  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1171  taurine ABC transporter permease  31.14 
 
 
272 aa  118  9.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.104716  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  27.7 
 
 
290 aa  118  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3456  binding-protein-dependent transport systems inner membrane component  29.36 
 
 
268 aa  118  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.133558  n/a   
 
 
-
 
NC_009511  Swit_2511  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
266 aa  118  9.999999999999999e-26  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4923  ABC transporter, permease protein  30.87 
 
 
268 aa  118  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4677  ABC transporter permease  30.87 
 
 
268 aa  117  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4536  ABC transporter, permease  30.87 
 
 
268 aa  117  1.9999999999999998e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5038  ABC transporter permease  30.87 
 
 
268 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4902  ABC transporter, permease protein  30.87 
 
 
268 aa  117  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  29.78 
 
 
279 aa  117  3e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6300  binding-protein-dependent transport systems inner membrane component  29.21 
 
 
272 aa  116  3.9999999999999997e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2784  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
269 aa  116  3.9999999999999997e-25  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
273 aa  116  3.9999999999999997e-25  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_008726  Mvan_3413  binding-protein-dependent transport systems inner membrane component  29.53 
 
 
271 aa  116  5e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0409101  normal  0.884011 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
273 aa  116  6e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  27.94 
 
 
266 aa  116  6e-25  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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