More than 300 homologs were found in PanDaTox collection
for query gene Bphy_6300 on replicon NC_010625
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010625  Bphy_6300  binding-protein-dependent transport systems inner membrane component  100 
 
 
272 aa  530  1e-150  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  42.97 
 
 
292 aa  204  1e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  39.83 
 
 
271 aa  184  1.0000000000000001e-45  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0622  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
257 aa  154  1e-36  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2784  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
269 aa  155  1e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
278 aa  146  4.0000000000000006e-34  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_013411  GYMC61_0589  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
269 aa  144  2e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2295  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
272 aa  142  6e-33  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1834  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
268 aa  142  7e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.101401  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
281 aa  140  3e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3456  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
268 aa  137  2e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.133558  n/a   
 
 
-
 
NC_009720  Xaut_1531  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
295 aa  136  4e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0802  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
274 aa  130  2.0000000000000002e-29  Clostridium phytofermentans ISDg  Bacteria  normal  0.240571  n/a   
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
302 aa  129  4.0000000000000003e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_011830  Dhaf_4556  binding-protein-dependent transport systems inner membrane component  26.98 
 
 
267 aa  129  6e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
273 aa  128  9.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3514  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
295 aa  128  1.0000000000000001e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  34.16 
 
 
263 aa  127  2.0000000000000002e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
263 aa  126  5e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
263 aa  125  5e-28  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_011898  Ccel_0879  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
274 aa  125  6e-28  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00112224  n/a   
 
 
-
 
NC_014213  Mesil_3278  ABC transporter related protein  32.93 
 
 
257 aa  125  7e-28  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.000407876  normal  0.0335836 
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  36.98 
 
 
263 aa  125  8.000000000000001e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
263 aa  125  1e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
274 aa  124  2e-27  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
273 aa  124  2e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
277 aa  123  3e-27  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.94 
 
 
274 aa  123  4e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_009012  Cthe_2574  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
270 aa  123  4e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4937  ABC transporter, permease protein  31.47 
 
 
268 aa  121  9e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5602  binding-protein-dependent transport systems inner membrane component  29.21 
 
 
302 aa  121  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.033554  normal  0.953446 
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
276 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  31.14 
 
 
272 aa  120  1.9999999999999998e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
278 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_010681  Bphyt_1832  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
274 aa  120  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.146122 
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
276 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  31.14 
 
 
272 aa  120  1.9999999999999998e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
274 aa  120  3e-26  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_005957  BT9727_4517  ABC transporter, permease  30.6 
 
 
268 aa  119  3.9999999999999996e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4923  ABC transporter, permease protein  30.6 
 
 
268 aa  119  3.9999999999999996e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
315 aa  119  6e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5061  binding-protein-dependent transport systems inner membrane component  28.28 
 
 
293 aa  118  7.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.877762  normal  0.739003 
 
 
-
 
NC_011368  Rleg2_5341  binding-protein-dependent transport systems inner membrane component  26.55 
 
 
293 aa  118  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.7364 
 
 
-
 
NC_010184  BcerKBAB4_4615  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
268 aa  117  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4677  ABC transporter permease  29.87 
 
 
268 aa  117  9.999999999999999e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4902  ABC transporter, permease protein  29.87 
 
 
268 aa  117  9.999999999999999e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK4536  ABC transporter, permease  29.87 
 
 
268 aa  117  9.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5038  ABC transporter permease  29.87 
 
 
268 aa  117  9.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3330  ABC transporter membrane spanning protein  29.1 
 
 
295 aa  117  9.999999999999999e-26  Agrobacterium vitis S4  Bacteria  normal  0.730487  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  31.29 
 
 
279 aa  118  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4903  ABC transporter, permease protein  30.6 
 
 
268 aa  117  1.9999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
279 aa  117  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
273 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4882  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
259 aa  116  3e-25  Paracoccus denitrificans PD1222  Bacteria  normal  0.947992  normal 
 
 
-
 
NC_008146  Mmcs_2524  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
279 aa  116  3.9999999999999997e-25  Mycobacterium sp. MCS  Bacteria  normal  0.667278  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  27.84 
 
 
329 aa  116  3.9999999999999997e-25  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0950  binding-protein-dependent transport systems inner membrane component  29.24 
 
 
283 aa  116  3.9999999999999997e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.616045  n/a   
 
 
-
 
NC_008705  Mkms_2569  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
279 aa  116  3.9999999999999997e-25  Mycobacterium sp. KMS  Bacteria  normal  0.568124  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  31.44 
 
 
282 aa  116  5e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_009077  Mjls_2561  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
279 aa  116  5e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0335  ABC transporter, permease protein  29.74 
 
 
268 aa  115  7.999999999999999e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3961  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
287 aa  114  1.0000000000000001e-24  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1056  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
266 aa  114  2.0000000000000002e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  26.64 
 
 
281 aa  114  2.0000000000000002e-24  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
277 aa  113  3e-24  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  26.32 
 
 
272 aa  113  3e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_007952  Bxe_B0493  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.8 
 
 
287 aa  112  8.000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  0.114665  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  28.84 
 
 
273 aa  112  9e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_010676  Bphyt_4033  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
287 aa  112  9e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  0.753159  normal 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  28.84 
 
 
273 aa  112  9e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0231  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
271 aa  112  9e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_2256  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
268 aa  111  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  28.84 
 
 
273 aa  110  2.0000000000000002e-23  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  38.22 
 
 
258 aa  110  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  27.04 
 
 
268 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_010551  BamMC406_0033  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
282 aa  110  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  0.589022  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  29.31 
 
 
261 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  29.59 
 
 
273 aa  110  2.0000000000000002e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_008390  Bamb_0024  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
285 aa  110  2.0000000000000002e-23  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  30.54 
 
 
252 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_008043  TM1040_3034  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
269 aa  110  3e-23  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0038  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
285 aa  110  3e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.090458  n/a   
 
 
-
 
NC_008542  Bcen2424_0032  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
285 aa  110  3e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  27.63 
 
 
264 aa  110  3e-23  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_010508  Bcenmc03_0051  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
282 aa  109  4.0000000000000004e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
246 aa  109  5e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007510  Bcep18194_A3216  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  31.12 
 
 
285 aa  109  5e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2746  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
283 aa  109  5e-23  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  25 
 
 
283 aa  109  5e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_008254  Meso_2962  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
280 aa  109  6e-23  Chelativorans sp. BNC1  Bacteria  normal  0.0794658  n/a   
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  28.38 
 
 
282 aa  108  7.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0253  ABC transporter, permease protein  32.1 
 
 
282 aa  108  7.000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  0.735185  n/a   
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  28.38 
 
 
282 aa  108  7.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3274  ABC transporter, permease protein  32.1 
 
 
282 aa  108  7.000000000000001e-23  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1853  ABC transporter, permease protein  32.1 
 
 
282 aa  108  7.000000000000001e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  0.989072  n/a   
 
 
-
 
NC_009074  BURPS668_0040  ABC transporter, permease protein  32.1 
 
 
282 aa  108  7.000000000000001e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0040  ABC transporter, permease protein  32.1 
 
 
282 aa  108  7.000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  0.522623  n/a   
 
 
-
 
NC_009080  BMA10247_2699  ABC transporter, permease protein  32.1 
 
 
282 aa  108  7.000000000000001e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2678  ABC transporter, permease protein  32.1 
 
 
285 aa  108  8.000000000000001e-23  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  27.06 
 
 
286 aa  108  8.000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
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