Gene Cphy_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0802 
Symbol 
ID5745282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1025368 
End bp1026192 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content36% 
IMG OID641291916 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001557928 
Protein GI160878960 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.240571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCATC GTATTAAAAA AGAGGATTAT TTATCCGCTT CTGCAATCCA TCAAGCGTAT 
CTGAAACGAT ATCAAAAGAG AGTAACAAAA ATTCGTATCG CGCAATGGAT TATATTTTTG
TCCTTTTTAA TTTTGTGGGA ACTTTCCACA AGGGTTGGAT GGCTAAATTC ATTTATATTC
AGTAGCCCTT CCAGAGTTGT AAAGTGCTTC GCTACAATGG CAAAAGACGG AACTGTTTTT
TACCATATCG GTATTACACT TTTTGAAACC TTCATAAGTT TTGGTTTAGT TATAGGAATC
GGGCTCCTCG TCGCTGTCTT ATTATGGTGG AATGAAAGTG TTGCAAAGGT ACTAGAACCT
TATCTTGTGG TTCTTAATAG CCTTCCGAAG TCAGCTCTTG CACCAGTCTT TATTGTTTGG
CTCGGGAATA ATATGAAGAC AATTATAGTA GCGGCGGTAA CAGTCGCAGT CTTTGGCACG
ATTATAACCT TATATACCAA CTTTAATTCA ACAGAACAAG ATAAATACAA ACTCATTTAT
ACCTTGGGTG GTACCAAAAA AGATGTCTTA TTTAAAGTAG TCCTTCCAGG TAACCTTCCT
TCTATTATTA GCTGTATGAA AGTCAATATC GGTCTGTCTC TGGTTGGTGT TATCATAGGA
GAATTTCTTG CAGCGAAGGC TGGTTTGGGA TATCTTATTG TCTACGGATC TCAGGTTTTT
AAACTAGACT GGGTTATTAT GAGTATTGTG ATTTTATGTA TTATTGCAAC TGCGCTTTAT
GGTATTCTTT CTTATATTGA GAGAAGAGTA AGAAAAAATA AATAG
 
Protein sequence
MMHRIKKEDY LSASAIHQAY LKRYQKRVTK IRIAQWIIFL SFLILWELST RVGWLNSFIF 
SSPSRVVKCF ATMAKDGTVF YHIGITLFET FISFGLVIGI GLLVAVLLWW NESVAKVLEP
YLVVLNSLPK SALAPVFIVW LGNNMKTIIV AAVTVAVFGT IITLYTNFNS TEQDKYKLIY
TLGGTKKDVL FKVVLPGNLP SIISCMKVNI GLSLVGVIIG EFLAAKAGLG YLIVYGSQVF
KLDWVIMSIV ILCIIATALY GILSYIERRV RKNK