Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5602 |
Symbol | |
ID | 8336962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6458107 |
End bp | 6459015 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958706 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003116302 |
Protein GI | 256394738 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.033554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.953446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG CCATCCTCTC CCCCACTGAC ACCAACGCTG ACACTGACAC CGACACCGTC GCCGCCGGCC AGCAGCGGCT GGACGAGCGC ACGCGGCGGG CGACCGTCGC CTTCCGCCGC CGCAAGCAGC AGATCTGGGG CGCCCGGGCG CTGCTCGCGG TGGTCGTCAT CGGCGGCTGG CAGTGGTTCA CCGCGGCCGG CTGGGTCGAC AAGTTCTTCT ACGCCCAGCC CTCCGGCATC TGGAACCGGC TGTGGGACTA CTTCCAGAAC GGCACCGAGT TCGGCTCCTA CCCGGCGCAG ATCGAGACCA CGATGCAGGA GGCGCTGTAC GGCTTCCTGA TCGGCACCGG CGTCGGCGTG GTGCTGGGCG TCGCGCTGGG GATGAACCGG TTCCTGGCCG AGGTGCTGGA TCCGTACATC AAGATCGTGA ACGCCGTCCC GCGCATCGTG CTCGGCTCGA TCTTCATCGT CGCCTTCGGC GTCGGGATGG CGCCGAAGGT GCTGCTGGCC GCGGTGCTGG TGTTCTTCAT CGTGTTCTTC AACGCCTTCC AGGGCGTGCG CGAGGTGGAC CGCAACGTGC TGAACAACGC CAAGGTGCTG GGCGCCAGCC GGTGGCACAC GATCCGGCAT GTGATCATCC CCTCGGCCCT GACCTGGATC ATCGCCTCCC TGCACAGCGC GTTCGGCTTC GCCATCGTCG GCGCGGTCGT CGGCGAGGTG CTGGGCGCGC AGAAGGGCCT GGGCCTGCTG ATCAAGTCGG CGCAGGGCAA CTTCGACCCC TACGGCGTGT TCGCGAACAT GTTCGTGATC GCCGCCCTGG TGCTGATCGT CGAGTTCGTC ATCGAACGCG TCGAGCGCCG GCTGCTGGCG TGGCGGCCGA AGGTCCAGTC CGAGACCGTC CTGGTCTGA
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Protein sequence | MSEAILSPTD TNADTDTDTV AAGQQRLDER TRRATVAFRR RKQQIWGARA LLAVVVIGGW QWFTAAGWVD KFFYAQPSGI WNRLWDYFQN GTEFGSYPAQ IETTMQEALY GFLIGTGVGV VLGVALGMNR FLAEVLDPYI KIVNAVPRIV LGSIFIVAFG VGMAPKVLLA AVLVFFIVFF NAFQGVREVD RNVLNNAKVL GASRWHTIRH VIIPSALTWI IASLHSAFGF AIVGAVVGEV LGAQKGLGLL IKSAQGNFDP YGVFANMFVI AALVLIVEFV IERVERRLLA WRPKVQSETV LV
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