| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0879 |
|---|
| Symbol | |
|---|
| ID | 7309722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 1056731 |
|---|
| End bp | 1057555 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643607816 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002505231 |
|---|
| Protein GI | 220928322 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00112224 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACATGT TTAAACATAA AGAACAAACT ATTGTGTCTC TGGAAAGGCT TGTCTATCTT
AAATCAAAGA AGCGGCGTAA AGTATCTGTC CTTGTAACAC AAATAGTGAT TCTTGTAGTG
TTTTTTGCAC AGTGGGAGAT ACTGGCAAGG CTGAATATTG TAGACTCTTT TATTACAAGC
CAGCCATCAC GTATTGCTAA TACCATAATC AATCTTTACA GTGAAGGACA GTTATTCCAT
CACATAGGAA TCACGTGCTG GGAAACTGTT GTAGGGTTTG TAGCAGGGAC AGTACTTGGT
ACATTAATTG CCGTTGTGCT TTGGTGGTCA GAATTTCTAT CAAAGGTGTT TGAACCTTAT
CTCGTTATAT TAAACAGTCT TCCAAAGATA GCTCTTGGAC CAATTTTTAT CGTTTGGTTC
GGAGCAGGAA CTACTTCAAT TATCATTATT GCTCTTGCTA TATCCATTGT TGTGTCAATT
CTGGAAGTGC TAAATGGATT CATGGCAACC GATGAAGAGC AGGTAAAGCT GGTGAAAACC
TTCGGTGCCA GTAGGTTTCA AGTATTTACC AAAGTGGTTT TCCCTGCCAA TCTTCCTGTA
ATTATAAACT CATTGAAAGT AAATGTTGGT CTTTCATGGG TAGGAGTAAT TGTTGGTGAA
TTTCTAGTTT CCAAATCAGG ACTTGGCTAT CTTATAGTGT ATGGCGGGCA GGTTTTCAAG
CTCGATCTGG TTATGGCAAG CGTTATAATA CTATGCTTTG CTGCAGGTAT TATGTATCAA
GCCGTTGTAC TGCTTCAAAA AATTCTTATA AAAAAACATA TCTGA
|
|---|
| Protein sequence | MYMFKHKEQT IVSLERLVYL KSKKRRKVSV LVTQIVILVV FFAQWEILAR LNIVDSFITS
QPSRIANTII NLYSEGQLFH HIGITCWETV VGFVAGTVLG TLIAVVLWWS EFLSKVFEPY
LVILNSLPKI ALGPIFIVWF GAGTTSIIII ALAISIVVSI LEVLNGFMAT DEEQVKLVKT
FGASRFQVFT KVVFPANLPV IINSLKVNVG LSWVGVIVGE FLVSKSGLGY LIVYGGQVFK
LDLVMASVII LCFAAGIMYQ AVVLLQKILI KKHI
|
|---|
| |