Gene Dhaf_4556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4556 
Symbol 
ID7261585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4848727 
End bp4849530 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content48% 
IMG OID643564473 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002460993 
Protein GI219670558 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATA GTTCTCCGGA ACATAGAGCC TATCTGAAAA AGGTAAGACA GGAAAAAGTC 
AAAGTCAGAG TGACTCAGGC TTTAATTCTG ATCATCGCCC TGGGCTTATG GGAGATCTGT
GCCCGGGCCG GCATTGTGGA TCCCTTCATT ACCAGTCAGC CCAGCCGTGT GCTGAAAACC
ATGATCAACC TTCATCAAGA AGGTGTATTG CTTCATCATA TAGCCATTAC CTGTATGGAA
ACCATCGTCG GCTTTATCCT GGGAACGGTC TTGGGAACGA TGATCGCCAT CGTCCTGTGG
TGGTCTGAAT TTATCTCCAA AGTCTCAGAA CCTTATCTCG TTATTCTTAA CAGTCTGCCC
AAAATTGCCC TGGGTCCCAT CTTCATTGTC TGGATCGGCG CCGGTCCGGC AGCCATTATC
GTCATGACCC TGGCTATTTC CCTGATTGTC ACTATTCTGG AAGTGCTCAA CGGTTTTTTA
TCCATAGACC AAGAGAAAAT CAAGCTGGTT CAGACCTTTG GCGGCACAAA GATTCAGGTG
CTCACCAAAG TTCTTCTGCC GGCCTCCTTT CCCACCATCG TCAATGCTCT GAAAATAAAT
GTCGGACTCT CCTGGGTTGG GGTTATCGTC GGTGAATTCC TCGTCTCCAA AGCGGGGCTG
GGCTATCTCA TCGTTTATGG AGGTCAGGTG TTTAAGCTGG ATTTGGTTAT GACCAGCGTC
TTCATCCTGG GCATAGCTGC GGCATTAATG TATCAGGGGG TGGTTTTGTT CGAAAAGATC
CTGGTCAAGA ATTCAGATTC ATAA
 
Protein sequence
MSNSSPEHRA YLKKVRQEKV KVRVTQALIL IIALGLWEIC ARAGIVDPFI TSQPSRVLKT 
MINLHQEGVL LHHIAITCME TIVGFILGTV LGTMIAIVLW WSEFISKVSE PYLVILNSLP
KIALGPIFIV WIGAGPAAII VMTLAISLIV TILEVLNGFL SIDQEKIKLV QTFGGTKIQV
LTKVLLPASF PTIVNALKIN VGLSWVGVIV GEFLVSKAGL GYLIVYGGQV FKLDLVMTSV
FILGIAAALM YQGVVLFEKI LVKNSDS