More than 300 homologs were found in PanDaTox collection
for query gene BBta_1169 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_1169  putative ABC transporter permease protein  100 
 
 
279 aa  543  1e-154  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  43.55 
 
 
273 aa  219  5e-56  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  43.15 
 
 
273 aa  213  1.9999999999999998e-54  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
281 aa  193  3e-48  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  41.2 
 
 
261 aa  181  1e-44  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  39.63 
 
 
277 aa  172  5e-42  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  37.77 
 
 
282 aa  171  1e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  40.24 
 
 
257 aa  162  4.0000000000000004e-39  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  40.66 
 
 
254 aa  159  6e-38  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.73 
 
 
249 aa  148  8e-35  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  42.36 
 
 
253 aa  147  1.0000000000000001e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
263 aa  146  3e-34  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
256 aa  146  4.0000000000000006e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
259 aa  144  1e-33  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
288 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  37.35 
 
 
258 aa  142  4e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  34.85 
 
 
259 aa  141  9.999999999999999e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  31.79 
 
 
287 aa  141  9.999999999999999e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
283 aa  140  1.9999999999999998e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
253 aa  139  4.999999999999999e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  32 
 
 
260 aa  139  7e-32  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
274 aa  139  7e-32  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
258 aa  139  7e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
253 aa  138  1e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
281 aa  137  1e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  33.48 
 
 
250 aa  137  2e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  34.19 
 
 
284 aa  137  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
257 aa  137  2e-31  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
254 aa  136  3.0000000000000003e-31  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  33.48 
 
 
251 aa  136  4e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  32.82 
 
 
266 aa  136  4e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  31.82 
 
 
250 aa  136  4e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  33.48 
 
 
251 aa  136  4e-31  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  37.56 
 
 
308 aa  136  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
249 aa  135  6.0000000000000005e-31  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
271 aa  135  7.000000000000001e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  31.82 
 
 
250 aa  135  8e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  31.82 
 
 
250 aa  135  8e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  31.82 
 
 
250 aa  135  9e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  31.82 
 
 
250 aa  135  9.999999999999999e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  30.35 
 
 
251 aa  134  9.999999999999999e-31  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  40.89 
 
 
281 aa  134  9.999999999999999e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
250 aa  134  9.999999999999999e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  40.89 
 
 
281 aa  134  9.999999999999999e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
246 aa  135  9.999999999999999e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  33.04 
 
 
250 aa  134  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
251 aa  134  1.9999999999999998e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  36.16 
 
 
245 aa  134  1.9999999999999998e-30  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
257 aa  134  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
250 aa  133  3e-30  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4514  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
263 aa  133  3e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.99074 
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
222 aa  132  5e-30  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
270 aa  132  6e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
306 aa  132  6.999999999999999e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30 
 
 
265 aa  132  7.999999999999999e-30  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
257 aa  132  7.999999999999999e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
258 aa  131  1.0000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
260 aa  131  1.0000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
255 aa  131  1.0000000000000001e-29  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  39.79 
 
 
322 aa  131  1.0000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_007951  Bxe_A2355  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.33 
 
 
274 aa  130  2.0000000000000002e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.214574  normal  0.0382396 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  31.75 
 
 
266 aa  130  2.0000000000000002e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  43.64 
 
 
258 aa  130  2.0000000000000002e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  33.61 
 
 
257 aa  130  3e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  34.75 
 
 
258 aa  129  4.0000000000000003e-29  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
274 aa  130  4.0000000000000003e-29  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
267 aa  129  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2763  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
275 aa  130  4.0000000000000003e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  34.75 
 
 
258 aa  129  6e-29  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
278 aa  129  6e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
281 aa  129  7.000000000000001e-29  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
256 aa  129  7.000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  32.49 
 
 
265 aa  129  8.000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  35.29 
 
 
322 aa  128  8.000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
259 aa  128  8.000000000000001e-29  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  32.93 
 
 
265 aa  128  9.000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  32.93 
 
 
265 aa  128  9.000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
279 aa  128  9.000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  29.13 
 
 
254 aa  128  9.000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  32.92 
 
 
257 aa  128  1.0000000000000001e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  32.93 
 
 
257 aa  128  1.0000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  32.93 
 
 
255 aa  128  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  32.93 
 
 
257 aa  128  1.0000000000000001e-28  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
329 aa  128  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
255 aa  127  3e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  33.59 
 
 
263 aa  126  3e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_010681  Bphyt_1832  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
274 aa  127  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.146122 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.06 
 
 
247 aa  127  3e-28  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  32.51 
 
 
257 aa  127  3e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  34.87 
 
 
288 aa  126  4.0000000000000003e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
255 aa  125  5e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1056  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
266 aa  125  6e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.498595  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
289 aa  125  6e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
255 aa  125  6e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
277 aa  124  2e-27  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
255 aa  124  2e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
263 aa  123  3e-27  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
275 aa  123  3e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  29.62 
 
 
256 aa  123  3e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  36.25 
 
 
488 aa  123  3e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
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