| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6052 |
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| Symbol | |
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| ID | 7975337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 774060 |
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| End bp | 774884 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644796611 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002947885 |
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| Protein GI | 239820700 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0454164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC TCAAACATCC CCCGTTCGTC GCCATGCCCG CTGTTCGCAT CGTGAAGAAG
AAGCCACCGC GGATCAACCC GCTCGAGCGC TATGCATCGT TGCTTCTGGC GGTGGCGATT
CTCCTGATCT GGCAGTTCGC GGTTCCGCTG GCCGGCCTGT CGGAGTTCGT GCTGCCAACG
CCGCTGGCCA TCGCAAAACG AATGGTCACC GACTTCAACT TGCTTGCGAC CCATTCCTAC
GTCACGCTGC TCGAAGTGCT CGGGGGCTTC CTGCTCGGCG TGCTGATAGG TATCCCGCTG
GCGCTTGCGA TCTTCTATTC GAAGGTCTTC GAGCGTGCCG TGTATCCGCT GCTGGTGGCG
TTGCAAACGG TGCCGAAGAT CGCATTGGCT CCACTGCTCG TTCTATATCT TGGCTATGGC
TGGGCACCAA AGATCAGCCT GGCGTTCCTG ATCTCGTTCT TCCCAATCGT GATCTCGACC
GTGGTCGGCC TTCAGTCGCT TGACAAGGCA CTCGTCAACA TGGTTCGCTC CATGGGTGCG
AGCGAGTCGC AGACCTTTTT CAAGGTGCGT TTGCCGGCCG CGCTGCCGAG CATCTTCGGC
GGCCTGAAGG TGGCGATCTC GCTGGCTGTG ATCGGCGCAA TCATCGGCGA GTACATCGCC
GCCGAGCGCG GCCTCGGTTA TCTGCAGCTG CAGGCGAACT CGCAATTCGA TACCACCCTC
AACTTCGCGA CCGTCGTCAC GATCTCGCTG ATCGGCGTGC TGCTCTATTT CGTCCTTGCC
ATTGTCGAGA GCAAGGTTTC GTTCCACCGT GAAAGTGCCA AATGA
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| Protein sequence | MTELKHPPFV AMPAVRIVKK KPPRINPLER YASLLLAVAI LLIWQFAVPL AGLSEFVLPT
PLAIAKRMVT DFNLLATHSY VTLLEVLGGF LLGVLIGIPL ALAIFYSKVF ERAVYPLLVA
LQTVPKIALA PLLVLYLGYG WAPKISLAFL ISFFPIVIST VVGLQSLDKA LVNMVRSMGA
SESQTFFKVR LPAALPSIFG GLKVAISLAV IGAIIGEYIA AERGLGYLQL QANSQFDTTL
NFATVVTISL IGVLLYFVLA IVESKVSFHR ESAK
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