Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2254 |
Symbol | |
ID | 6409914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2446701 |
End bp | 2447495 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712138 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001991250 |
Protein GI | 192290645 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.440017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCG TAAAGCTCCT GATGCTGCAA TTTTTCGTCG CGATCGTCGC GCTGACGGTC TGGCAGGTGC TGACCACTGT GCCGATCGCC GGCAGGTTGC TGCTGCCGCC GTTCTTCTTC TCGACGCCGG TGGATGTGGC CAAGCAGGTT ATCGCCTGGT TCGCTTCCGG GGTGATCTGG AAGCACTTGT GGATCACGCT GCAGGAGTCG CTGCTCGCCT TCGTGATCGG CTCGTTCGCG GGCGTGCTGG TCGGCTTCTG GTTCGCCCGG CAGCCACGGG TGGCGGCGGT GTTCGATCCC TATGTGAAGA TGGTCAACGC GCTGCCGCGC GTGGTGCTGG CGCCGATCTT CACGCTGTGG CTGGGGCTCG GCATCTGGTC CAAGGTCGCG CTCGGCGTGA CGCTGGTGTT CTTCGTGGTG TTCTTCAACG TCTATCAGGG CGTCAAGGAA ACCAGCGCGA CACTGGTCGA CAACGCCCGG ATGCTTGGCA TGAGCGAGCG GCAGATGATG CGCCATGTGT TCTGGCCGTC GGCGCTGTCC TGGATGTTCT CCTCGCTGCA CACCGCAATC GGGTTTGCGG TGGTCGGTGC GGTGGTCGGC GAGTATCTCG GCGCCGCGGC CGGGCTCGGC TATCTGATCC AGCAGGCGGA GGGGACTTTC GACGTCGCCG GCGTATTCGC CGGGATGTTC GTGCTGTCGG TGTTCGTGAT CCTGATCGAC CTCGCAGTCA GTCTGGTGGA GCGGCGCCTG TTGGTGTGGC GGCCGCAGCC GAGCGGGGCG CAGCAGGCGG ACTAG
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Protein sequence | MSRVKLLMLQ FFVAIVALTV WQVLTTVPIA GRLLLPPFFF STPVDVAKQV IAWFASGVIW KHLWITLQES LLAFVIGSFA GVLVGFWFAR QPRVAAVFDP YVKMVNALPR VVLAPIFTLW LGLGIWSKVA LGVTLVFFVV FFNVYQGVKE TSATLVDNAR MLGMSERQMM RHVFWPSALS WMFSSLHTAI GFAVVGAVVG EYLGAAAGLG YLIQQAEGTF DVAGVFAGMF VLSVFVILID LAVSLVERRL LVWRPQPSGA QQAD
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