| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0267 |
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| Symbol | |
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| ID | 7972616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 288628 |
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| End bp | 289458 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790870 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942196 |
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| Protein GI | 239813286 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0872978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACG CAAGCACGAC CACGGCCACG CCGTGGACAC CGCCGGCCGA CGGCACCGCC
GCCTCGGCAC CGAAGCCGCC GCTGCGCGAC CGGCTGCTGC CCTTCATCGG CCCCTTGGCG
CTGTTCATCG TGTGGGACCT GGCGGTGCGC CTGGGCTTCA TCAAGCCGAT CCTTCTGCCC
ACGCCCGCCG ACACCGTGGC GGCGCTCATC ACGGGGCTCG CGGGCGGGCC GCTGCTCACC
GACTTCGCGA TGACCGTGTG GCGCACGCTG CAGGCCTTCG CGATTGCGGC GGTGGTCGGC
GTGCCGCTGG GCGTGCTGCT CGGCAGTAAC GAAAAGGCCT ACCGCAGCGT CGAGTTCCTG
ATCGACTTCT TCCGCTCCAC GCCTTCGTCC GCGCTGATCC CGCTGTTCCT CCTGATCTTC
GGCGTGTCGG ACGTCAACAA GGTGGCGATC GCGGCTTTCG GCGCGCTGCT GATCGTGGTG
TTCAACAGCG CCTACGGCGT GATCAACGCG CGCAAGCAGC GCGTGATGGC GGCGCGCGTC
ATGGGCGCTT CGCGCTGGCA GATCTTCAAG GACGTGCTGG TGTGGGAAAG CCTGCAGCCC
AGCTTCGTGG GCCTGCGCTC GGCGGTGTCG ATGGCGCTGG TGATCGTCAT CGTGGCCGAG
ATGTTCATCG GCTCGGACAC GGGCCTCGGC CACCGCATTA TCGATGCGCA GCAGGTGCTC
AACGTGAAGA GCATGTATGC GGCCATTCTG GCGGCGGGCG CGCTGGGCTA TGCGCTCAAC
ATCCTCTTCC TGATTGCCGA GCGCCGCATC GTGCACTGGA GCGGAAGATG A
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| Protein sequence | MADASTTTAT PWTPPADGTA ASAPKPPLRD RLLPFIGPLA LFIVWDLAVR LGFIKPILLP
TPADTVAALI TGLAGGPLLT DFAMTVWRTL QAFAIAAVVG VPLGVLLGSN EKAYRSVEFL
IDFFRSTPSS ALIPLFLLIF GVSDVNKVAI AAFGALLIVV FNSAYGVINA RKQRVMAARV
MGASRWQIFK DVLVWESLQP SFVGLRSAVS MALVIVIVAE MFIGSDTGLG HRIIDAQQVL
NVKSMYAAIL AAGALGYALN ILFLIAERRI VHWSGR
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