More than 300 homologs were found in PanDaTox collection
for query gene Mnod_0475 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_0475  transcriptional regulator, LuxR family  100 
 
 		 123 aa  232  1.0000000000000001e-60  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.282737  n/a   
 
 
-
 
NC_010511  M446_1716  LuxR family transcriptional regulator  85.37 
 
 		 118 aa  189  9e-48  Methylobacterium sp. 4-46  Bacteria  normal  0.18507  normal  1 
 
 
-
 
NC_009485  BBta_3765  LuxR family transcriptional regulator  60.91 
 
 		 140 aa  114  6e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.825501  normal  1 
 
 
-
 
NC_007964  Nham_1032  LuxR family transcriptional regulator  68.25 
 
 		 201 aa  85.1  3e-16  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2446  transcriptional regulator, LuxR family  63.64 
 
 		 188 aa  81.6  0.000000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0902  two component transcriptional regulator, LuxR family  63.49 
 
 		 208 aa  76.6  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.154451  n/a   
 
 
-
 
NC_011891  A2cp1_0906  transcriptional regulator, LuxR family  63.49 
 
 		 208 aa  76.3  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.000000244022  n/a   
 
 
-
 
NC_009675  Anae109_0915  two component LuxR family transcriptional regulator  62.5 
 
 		 202 aa  75.5  0.0000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.000299753  normal  1 
 
 
-
 
NC_007760  Adeh_0857  two component LuxR family transcriptional regulator  61.9 
 
 		 211 aa  74.7  0.0000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.00237341  n/a   
 
 
-
 
NC_009972  Haur_4091  LuxR family transcriptional regulator  57.81 
 
 		 191 aa  74.3  0.0000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0720604  n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  53.73 
 
 		 206 aa  71.2  0.000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0799  response regulator receiver protein  50.65 
 
 		 204 aa  70.9  0.000000000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.403434 
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  53.62 
 
 		 209 aa  70.9  0.000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal  1 
 
 
-
 
NC_008699  Noca_4382  regulatory protein, LuxR  52.63 
 
 		 1006 aa  70.5  0.000000000007  Nocardioides sp. JS614  Bacteria  normal  0.172901  n/a   
 
 
-
 
NC_009767  Rcas_1228  LuxR family transcriptional regulator  53.97 
 
 		 204 aa  68.9  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  45.83 
 
 		 207 aa  68.6  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3760  response regulator receiver protein  60.66 
 
 		 245 aa  68.6  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.358522  normal  0.345814 
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  50 
 
 		 209 aa  67.8  0.00000000004  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_007964  Nham_1881  LuxR family transcriptional regulator  57.53 
 
 		 199 aa  67.8  0.00000000004  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  47.06 
 
 		 206 aa  67.8  0.00000000005  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_3710  LuxR family transcriptional regulator  47.13 
 
 		 426 aa  66.6  0.0000000001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_0164  response regulator receiver protein  53.42 
 
 		 128 aa  66.6  0.0000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  54.1 
 
 		 246 aa  65.5  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
NC_011894  Mnod_5613  transcriptional regulator, LuxR family  44.94 
 
 		 238 aa  65.5  0.0000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  55.88 
 
 		 212 aa  65.1  0.0000000003  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_008025  Dgeo_1626  two component LuxR family transcriptional regulator  56.45 
 
 		 194 aa  65.1  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.947018 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  54.1 
 
 		 212 aa  65.1  0.0000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013411  GYMC61_0749  transcriptional regulator, LuxR family  50.82 
 
 		 500 aa  64.7  0.0000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  53.97 
 
 		 206 aa  64.7  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  50.79 
 
 		 238 aa  64.7  0.0000000004  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  50.79 
 
 		 250 aa  64.7  0.0000000004  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_008781  Pnap_0105  two component LuxR family transcriptional regulator  48.05 
 
 		 219 aa  64.7  0.0000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0920509 
 
 
-
 
NC_012791  Vapar_3549  transcriptional regulator, LuxR family  48.31 
 
 		 1022 aa  64.3  0.0000000005  Variovorax paradoxus S110  Bacteria  normal  0.642921  n/a   
 
 
-
 
NC_009972  Haur_4039  two component LuxR family transcriptional regulator  38.18 
 
 		 250 aa  64.3  0.0000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.512873  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  49.21 
 
 		 226 aa  63.9  0.0000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  55.74 
 
 		 212 aa  63.9  0.0000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  31.78 
 
 		 215 aa  64.3  0.0000000006  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009972  Haur_0710  two component LuxR family transcriptional regulator  52.38 
 
 		 240 aa  63.9  0.0000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  46.67 
 
 		 257 aa  63.9  0.0000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_013131  Caci_8304  transcriptional regulator, LuxR family  49.3 
 
 		 1084 aa  63.9  0.0000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  52.86 
 
 		 204 aa  63.9  0.0000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  51.61 
 
 		 213 aa  63.9  0.0000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2359  two component transcriptional regulator, LuxR family  46.91 
 
 		 247 aa  63.5  0.0000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0990205  decreased coverage  0.00133027 
 
 
-
 
NC_009767  Rcas_4428  two component LuxR family transcriptional regulator  52.46 
 
 		 231 aa  63.5  0.0000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  41.07 
 
 		 227 aa  63.5  0.000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0926  regulatory protein, LuxR  51.47 
 
 		 878 aa  63.2  0.000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.289088  normal  1 
 
 
-
 
NC_009806  Krad_4530  two component LuxR family transcriptional regulator  58.93 
 
 		 241 aa  63.2  0.000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  hitchhiker  0.00470183 
 
 
-
 
NC_013757  Gobs_4942  two component transcriptional regulator, LuxR family  53.03 
 
 		 222 aa  63.5  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  50.75 
 
 		 212 aa  63.5  0.000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  53.97 
 
 		 208 aa  62.8  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_008825  Mpe_A0763  ATP-dependent transcriptional regulator-like protein protein  56.9 
 
 		 919 aa  63.2  0.000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.422144  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  48.33 
 
 		 216 aa  63.2  0.000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  34.71 
 
 		 212 aa  62.8  0.000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_009511  Swit_2814  LuxR family transcriptional regulator  50 
 
 		 146 aa  62.4  0.000000002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.0940527 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  49.18 
 
 		 210 aa  62  0.000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  53.97 
 
 		 217 aa  62.8  0.000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal  1 
 
 
-
 
NC_007511  Bcep18194_B1611  two component LuxR family transcriptional regulator  47.3 
 
 		 215 aa  62.4  0.000000002  Burkholderia sp. 383  Bacteria  normal  0.650425  normal  0.234442 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  48.68 
 
 		 218 aa  62.4  0.000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3477  ATP-dependent transcription regulator LuxR  56.45 
 
 		 877 aa  62.4  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  47.62 
 
 		 228 aa  62.4  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  47.5 
 
 		 218 aa  62.8  0.000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  48.68 
 
 		 218 aa  62  0.000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0414  LuxR family transcriptional regulator  49.25 
 
 		 544 aa  62.4  0.000000002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.865726 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  48.68 
 
 		 218 aa  62  0.000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  50.79 
 
 		 242 aa  61.6  0.000000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_0661  two component LuxR family transcriptional regulator  52.46 
 
 		 239 aa  61.6  0.000000003  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000223942  normal  0.0624831 
 
 
-
 
NC_014248  Aazo_2840  LuxR family two component transcriptional regulator  50 
 
 		 238 aa  61.6  0.000000003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  45.57 
 
 		 221 aa  61.6  0.000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  52.31 
 
 		 213 aa  62  0.000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50 
 
 		 219 aa  61.6  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  41.1 
 
 		 213 aa  61.6  0.000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  52.38 
 
 		 211 aa  61.6  0.000000003  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  50.79 
 
 		 242 aa  61.2  0.000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  45.9 
 
 		 208 aa  61.6  0.000000004  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2846  two component LuxR family transcriptional regulator  50 
 
 		 209 aa  61.2  0.000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  36.84 
 
 		 213 aa  61.2  0.000000004  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  35.63 
 
 		 216 aa  61.2  0.000000004  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  47.06 
 
 		 219 aa  61.2  0.000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_008025  Dgeo_1496  LuxR family transcriptional regulator  48.65 
 
 		 197 aa  60.8  0.000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  52.38 
 
 		 209 aa  61.2  0.000000005  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  47.67 
 
 		 215 aa  60.8  0.000000006  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0139  GAF modulated transcriptional regulator, LuxR family  43.96 
 
 		 506 aa  60.8  0.000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  39.05 
 
 		 209 aa  60.8  0.000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  47.67 
 
 		 215 aa  60.8  0.000000006  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  50.88 
 
 		 210 aa  60.8  0.000000006  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_008576  Mmc1_3704  LuxR family transcriptional regulator  51.79 
 
 		 220 aa  60.8  0.000000006  Magnetococcus sp. MC-1  Bacteria  normal  0.0339608  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.78 
 
 		 234 aa  60.8  0.000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  50 
 
 		 227 aa  60.8  0.000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009439  Pmen_1766  two component LuxR family transcriptional regulator  42.31 
 
 		 203 aa  60.8  0.000000006  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00488071  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  46.75 
 
 		 218 aa  60.5  0.000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  48.53 
 
 		 231 aa  60.8  0.000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  39.8 
 
 		 234 aa  60.5  0.000000007  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  46.51 
 
 		 215 aa  60.5  0.000000007  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  41.33 
 
 		 227 aa  60.5  0.000000007  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  46.77 
 
 		 211 aa  60.5  0.000000007  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  44.16 
 
 		 216 aa  60.8  0.000000007  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  47.62 
 
 		 236 aa  60.5  0.000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  52.31 
 
 		 220 aa  60.5  0.000000007  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_009338  Mflv_4288  metal dependent phosphohydrolase  51.19 
 
 		 519 aa  60.5  0.000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.472516  normal  0.533265 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50 
 
 		 220 aa  60.5  0.000000007  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
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