| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8304 |
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| Symbol | |
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| ID | 8339683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9620456 |
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| End bp | 9623710 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961390 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003118968 |
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| Protein GI | 256397404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC ATGTGTCGAT GCGCCAGGTG AGCCCCGTCT TCGTCGGCCG CGGGCCGGAG
CTGTCCAAGC TCCGCTCGCT GCTGGCCAGC GCTTCTCGGG GCGAGCCCGC GGTGGTGGTC
GTCGGCGGGG ACGCCGGGAT CGGGAAGTCG CGGCTGATCG AGGAGTTCGT CCGGCCGCTG
CTCGACCTGG ATCCCGCGAA CCTCGTCAAC CTGGCGGCCG GCAACGCCAC CGCGTCAGGC
GCCGGAAGAA GCGATAGAGC AGATAGAGCA GATAGAGTCG ACAGCGCCGA CGAATCGGGC
GCGATTCCCG TCACGGACGT GCGCGTCCTG ATCGGCGGCT GCGCGGAACT CGGCGACGAA
GGGGTGGCCT ATGCCCCCTT CGTCGCCGCG CTGCGCCAGC TGCTGCGCGA CCTGCCCGGC
GCGTTCGGGG ACGGCGACGG CGTGCGCCGG CGCGAGCTGG CCTGGCTGCT GCCGGAACTG
GCCGAAGGGC TGTCCGGCGA CGACTCCCCG CGCGGCGGCA TGATGCGTCC GGCGGGCATG
GAGCACCACA GCGACGCCCT CCCGGCCGTG ACGCGCGCCG GTGAGCAATC CGTCCGCGGG
CACCTGTTCG ACGCCGTCCT GGGCCTGCTG GAGGACCTCG GCTCGGACGA GACGCTCCTG
CTGGTCCTGG AAGACCTGCA CTGGGCCGAC CGCTCCACGC GCGACCTGCT GGGCTTCCTG
TCCCGCTCGC TGCGCGACTC GCGTGTCCTG GTCGTCGGCA CGTACCGCAC CGACGACCTG
CACCGCGGCC ATCCGCTGCG ACCGTTTTTG GCCGAGCTGG ACCGGATCCG GGGCGTGCGG
CGCATCGACC TCGGCCCGCT GACCACCGGC GAGACCGCCG AGCAGCTGGC CGCGATCTAC
GGCCGGACCG GCCGCGACCT GCCGCCGGGC TTCGCCGAGG AGGTGTTCGC GCGCGCCGAG
GGGAACCCGT TCTTCACCGA GGAGCTGGCG TGCGCGGCGG ACGGCTCGAG CCTGATGCCC
TCCGACGTCG GCGGTTTCGC GCTCTCCGAT ACGCTGCGCG ACCTGCTCTT GATCAAGGTG
GAGCAGCTTC CCGAGCCCAC GCAGCGGATG CTGCGCCTGC TCTCGGCCGC GCTGCCGCCG
GTGGACCACC GTTTCCTGCT GCTGGTCACC GGCGCCACCG ACGACGAGCT GAACGAGCAG
ATCCGGCCGG CGTTCCAGGC GCACATCCTG ATCCCCGGCG AGGGCCCGAC CAGCTATCGC
TTCCGGCACG CGCTGCTGCG CGAAGCTGTG CACAACGAGC TTCTGCCGGG CGAGCACTCG
GCTTTGCACC GCAAGTACGC CGAACTCCTG GAAGCCGAGC CGTCGCTGGT CGCCGCGGAA
GCCCGCGAGG TCGAGCTGGC GCACCACTGG TACTCGGCGC GCGACTATCC CCGCGCCTAC
GACGCCGCGT TACGCGCCGC CGAGGCTGCC GACGCGCGCT ACGCGTACGT CGAAGAACAC
CAGATGCTGG AGCGCGCGCT GGACCTGTGG GACCAGGTGC CCGAAACCGG CCTGGAGTAC
GCCCGGCTGC TCTACAAGAC CGCCTGCGCC GCGCATCTGG CCGGCGACCC GCATCGTGCG
TTGTCCTTGA CCGACAAGGC ACTCAAGCGC GTCGATCCCG ACCAGGACCC CGAGCTGGCC
GCGCTGCTGC ACCACCTGCG CAGCCGGGAC CACCACATCC TGGGACGCGG CGACGGGATG
GCCGACATCT GGGCCGCGCT GGATCTGGTG GACGGCGAGC AGTGCCCACA GGTGCGCGTG
CAGATCACGA ACAGCGCCTC GTTCATCAAG ATGCTGACAT CCGACGACAT CGACGCCGCG
CTGCGCTTCG CCGAGGAGAC CGCGCTGCTG GCCGACAAGA TCGACTCGGA CCTGTACCGG
ATCGCGGCGG CCATCACCAA GGGCACGGTG CTCGCCGGAC AGGTCTCGCT CGGCACGCAC
GAGGAGGGCC TGGCGATCCT GCGGCAGGCC ATCATCGACG GCCTGGGCTA TGGCGACCCG
GGCATCATCG GGCGCGGCTA CATCAACCTG TGCAGCGCGC TGGAGACCCT GGACCGGCAT
CAGGAAGCGG TGCAGGTGGC GCGCGCCGGA CTGGCCGAGC TCAAGCGGCG CGGCGTCCGG
CTGCGGGTGG CCGAGAGCAT GCTGTGGCTG AACATGGCCG AGTCGCTGAT CGCGCTCGGT
GACTGGGAGG GCGCCGACGC CGCGCTGACC TCCAGCCTGG ACCTGGACCC GCCGGGCATC
CACGGCGCCA CCACCCACGA GTACCTCGCC GACCTGGCGC TGCTCGGCGG CGACGCCGAG
CACGCGCGCG GCGAGGCGGC GCTGGGCGCG CGCATCCCGA GCCGCACCTT CGAGCACCAA
TACGCGCTGC CGGGTATCCG CCGCGAGATC GAGAAGGCGG TCTGGCTGAC CCGCTCGATC
AGCGACGCGC GCACGGCGTT CCAGGTGTTC CTGGACAAGC CGCAGTTCCT CGGCGACGAG
CGCTACGCCT GGCGCGTGCT GACCGCGATG GCGATGGCCG AGGCGGACCA CGCAGAGCTT
CGTCGGTCTG CACAGCCCAC GCGCGCCGCG GCCCGTTCCG GCACGTCGGC GGTCGACGCC
GCCGGGTCGG CGATGGTGGC GGCGCTCGCC GAACGCGCCG GCCGACTTCC GGCGCTGACG
CCGAGCCAGG CCGCGGCCGC CGCGCAGGTG GCGGCGGAGC TGGCGCGCTG GCGGGGCGTC
GCCGGCGCGG CGGAGTGGGC GACGGCGAGC GAGTTGGCGG CGCGCGAAGG CGTGCACGCG
CATCAGGCCG CGTACATCAA CTTCCGCGCT TCGGAGGCCA GCGCCGCCAA CGGCGACCGC
GACCACGCGG CCGAACTGCT GCGCCGCGCG GTGAAGGCGA TCGCCACGCT CCCGGCCGGA
CCGCTGTGCC TGGAGGTGCA GGCGCTGGCG CGCCGCGCGC GGCTGGACAT CAGCGACTGC
ATGCCGGAGG CTCCGGTACC CGGCGGCGGC CGGGGCGCGG ACTCGGGCTC GCCGTTGGGA
CTGACGGCGC GCGAGTTGGA GGTGCTGGCG CTGGTCGCGC AGGGCTTGTC CAACCGGCAG
ATCGGCGAGC GGCTGTTCAT CTCGACCAAG ACCGCGAGCG TGCACGTCTC CAACATCCTG
GCCAAACTGG GAGTTTCCGG ACGCGGCGAG GCCGCCGCCG TGGCGCACCG GCTGCGGGTG
TTCGAGGAGG CATAA
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| Protein sequence | MLDHVSMRQV SPVFVGRGPE LSKLRSLLAS ASRGEPAVVV VGGDAGIGKS RLIEEFVRPL
LDLDPANLVN LAAGNATASG AGRSDRADRA DRVDSADESG AIPVTDVRVL IGGCAELGDE
GVAYAPFVAA LRQLLRDLPG AFGDGDGVRR RELAWLLPEL AEGLSGDDSP RGGMMRPAGM
EHHSDALPAV TRAGEQSVRG HLFDAVLGLL EDLGSDETLL LVLEDLHWAD RSTRDLLGFL
SRSLRDSRVL VVGTYRTDDL HRGHPLRPFL AELDRIRGVR RIDLGPLTTG ETAEQLAAIY
GRTGRDLPPG FAEEVFARAE GNPFFTEELA CAADGSSLMP SDVGGFALSD TLRDLLLIKV
EQLPEPTQRM LRLLSAALPP VDHRFLLLVT GATDDELNEQ IRPAFQAHIL IPGEGPTSYR
FRHALLREAV HNELLPGEHS ALHRKYAELL EAEPSLVAAE AREVELAHHW YSARDYPRAY
DAALRAAEAA DARYAYVEEH QMLERALDLW DQVPETGLEY ARLLYKTACA AHLAGDPHRA
LSLTDKALKR VDPDQDPELA ALLHHLRSRD HHILGRGDGM ADIWAALDLV DGEQCPQVRV
QITNSASFIK MLTSDDIDAA LRFAEETALL ADKIDSDLYR IAAAITKGTV LAGQVSLGTH
EEGLAILRQA IIDGLGYGDP GIIGRGYINL CSALETLDRH QEAVQVARAG LAELKRRGVR
LRVAESMLWL NMAESLIALG DWEGADAALT SSLDLDPPGI HGATTHEYLA DLALLGGDAE
HARGEAALGA RIPSRTFEHQ YALPGIRREI EKAVWLTRSI SDARTAFQVF LDKPQFLGDE
RYAWRVLTAM AMAEADHAEL RRSAQPTRAA ARSGTSAVDA AGSAMVAALA ERAGRLPALT
PSQAAAAAQV AAELARWRGV AGAAEWATAS ELAAREGVHA HQAAYINFRA SEASAANGDR
DHAAELLRRA VKAIATLPAG PLCLEVQALA RRARLDISDC MPEAPVPGGG RGADSGSPLG
LTARELEVLA LVAQGLSNRQ IGERLFISTK TASVHVSNIL AKLGVSGRGE AAAVAHRLRV
FEEA
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