| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0926 |
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| Symbol | |
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| ID | 5200552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1028407 |
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| End bp | 1031043 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580472 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001261431 |
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| Protein GI | 148553849 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.289088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAC ATTTCTCTGC AGCGTTGACG AAGTTCACGC CACCCGTGAA CTGGGGCCGG
ACGATGGCGC GGCCCCGCCT GCTCGCCATG GCCAGCGCGT TCGAGGACAA GCGCCTCGTG
CTGGTCACCG CCGCCGCCGG TTCGGGCAAG ACGACCTTCA TGTCGCAATG GTATGCGGCG
CTCGGCGAGC AGGGGCGGCT CGTCGCCTGG CTGTCGCTCG ACGAGCGCGA CCGCAATCCG
GGCCGGCTGC TCTCGCTGCT CGCGGAGAGC CTGCGGCTGG CGGCCGACGA GGCGCAGCTT
TCGGGCGAGC GCTTCGCGCT CAACGGGTTC GAGTTGCAGT CCGACGACTT CATCGACAGC
TTCGTCAACG CGGTCTCGCT GCTCGGCCAG CGGACGGCGG TGTTCGTCGA CGATTATTAT
CTGGCGGCGA CGCCCGAGAA CGACCTCGTC CTGCGCGAGA TCCTCCGGCT GGCGCCGCCC
AACCTGCTGA TCGTCCTGTC GAGCCGCGCC TATCCCGACC TCGGGCTCGC CCGGCTGCGC
GCCTATAGCG CGATGGCGGA GGTGGATTTC GACCAGCTCC GCTTCGACGG CGACGAGGCG
ACCGCCTTCA TGCGCGATGT CCACGGCATC GATATCGGCC GCAGCGGCGG CGAGCTGTTC
TGCACACGGA CCGAGGGCTG GATCGCCGGA TTGCAGCTCG CCTCGCTCTC GCTCAAGGGC
CGGGAAGGCC ATGTCGAGCT GCTCGAGAAT TTCGCGGGCA GCCGCAGGGA GGTCGCCGAC
TATCTGAGCT CCTTCGTGCT CGACGAGCAA TCGGCGGACG TCCGCGACTT CCTGTTCCGT
ACCGCGCTGC TCGACCGTTT CGACTGCGAC CTGGCCGGCG CGGTGACCGG AATCGCCGAT
GCGCAGGGCA TGATCGAGCT GGTCGAGGCG GCCAACCTCT TCATCGTCCC GCTCGACGAC
CAGCAGCGCT GGTATCGCTA TCATCATCTC TTCCAGGATT TCCTGCGCGG CCGGGCCCCG
CGCGAAGGCA TCGACCTTCC GGCGGTCTAT GCCGCCGCGG TGCGCCATTG CGAGGAATGC
GGGCTGGGCG AGGATGCGGT CGCCTATGCG CTGGCGAGCA GGGACGAGGC CAAGGCGGCG
GACCTGATCG CCGAGAGCGC GATGGCGCTG ATCTACAAGG GCGACATACC GCGCCTCGCC
TCCTGGCTGG AGAGCGTCTC CGAAAGCGTC ATGCAGAGCC ATCCGAGGTT GCCGACGATC
CGCTGCTGGG CGCTGTTCCA CGCGGGCCAG TGGGAGGCGG GCGAGGCGGC GCTGGGCGAG
ATCGCGCAGC GCCGCGGCGA TGGCGGCGAT ACCGCGGAGA TCGAGCTGCT CGACGTCGCG
ATGCGCGTCG CCGCCGACGA GCTGGAGGAT ATCCTCGTCC GCGGCGGCGA ACTGGTCGAC
CGGCTCGAGG ACAGCGCCCC CTTCCTGGCG GGGACGCTCG CCAACTTCGT CACGATGAGC
CGGATCGGCA TCGGCGACTA TGAGACGGCG TGGAGCTTCT GCGACAAGGC GGGGACGCTG
CTGCTACGGG CGGACTGCCC CTATGGCTAT ATCTTCTCGC GGTGCACGCG GGCGATCTGC
CTGATCGCGG AGGGCAAGGC CGACGTCGCG GATGCCGAGC TGGCCAAGGC CGAGCAGCTC
GCCAACCGCA CGGCAGGCAA CATCTCCTTC GCGGCGGCGC TGTGCCGGGG CTGGCGGGGG
GCCTGCGCCT ATGAGCGGGG GGACCTCCTC ACCGCGCGGC AGCAGCTCGA ATTCGCCGTG
CCGCTGATCC GGCGGTGCGG CAATATCGAG ATACAGCGCC GGCTGGCGGT CTATCTGAGC
CGCACCTGCG CGGCGCTGGG CGACCGGGCG GCGGCGCATG ACGTGCTCGA CGAACTGGCG
GCGTCGCGCC ATGGTGACAG CGCCGGCAAG ACCCGGACGA CGGTCGCGGC CGAGCGGATC
AGGCTGTTGC TGGGGGAGGA GGACGTCCGT CAGCTCCGGC TCGTCTGGGC CGAACTCGAC
CGCTTCGCCG CGCGGGAAGG CGCGCTTCCC GACCGGCTGC TGTTCGACGT GGAGATCAGC
CGGCTGCGGA TGATGATCGC GGAAGGGCGC TGGGGCGAGG CGGCCGGCGC GACGCCCCGG
CTCGCGGCAT GGCTGGAGCG CCGGCAGAAC AGCGCCCGCC CGCGCGCCGA GCTGCTGCTG
GTCGAGGCGC AGATCCAGCT CGGCCGCCAG GACGCCGCCG CGAACCGGCT GGCGCGGCAG
GCACGCGTCA CCGGCGAGCG TTTTCCGATG GTCTTCCGCG AGGCGCCCGA TCCGGTCCAG
GCACTGCTCA ACGGCGACTG GGACGGGGAG GGGACCGGGC CGGAGACGAG CGACGCCCTG
CAACTGGCCG CGACCGAGCA TGGCCTGAGC GCGCGCGAGG GCGAGATCCT CTCGTTGGTG
ATCGAAGGGC ACAAGAACAA GTGGATCGCC CGGCGGCTGG GCCTGTCCGA GCACACCGTC
AAATGGCACG TCCGCAATGT GCTGGAGAAG CTCGGCGCGC CGAACCGCGC CTCGGCGGGG
GCGATGGTCC GGCATCTGGA GCTGGCGTCG TCGCGGGCCG CCGCCGGCCG GCGATAG
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| Protein sequence | MAAHFSAALT KFTPPVNWGR TMARPRLLAM ASAFEDKRLV LVTAAAGSGK TTFMSQWYAA
LGEQGRLVAW LSLDERDRNP GRLLSLLAES LRLAADEAQL SGERFALNGF ELQSDDFIDS
FVNAVSLLGQ RTAVFVDDYY LAATPENDLV LREILRLAPP NLLIVLSSRA YPDLGLARLR
AYSAMAEVDF DQLRFDGDEA TAFMRDVHGI DIGRSGGELF CTRTEGWIAG LQLASLSLKG
REGHVELLEN FAGSRREVAD YLSSFVLDEQ SADVRDFLFR TALLDRFDCD LAGAVTGIAD
AQGMIELVEA ANLFIVPLDD QQRWYRYHHL FQDFLRGRAP REGIDLPAVY AAAVRHCEEC
GLGEDAVAYA LASRDEAKAA DLIAESAMAL IYKGDIPRLA SWLESVSESV MQSHPRLPTI
RCWALFHAGQ WEAGEAALGE IAQRRGDGGD TAEIELLDVA MRVAADELED ILVRGGELVD
RLEDSAPFLA GTLANFVTMS RIGIGDYETA WSFCDKAGTL LLRADCPYGY IFSRCTRAIC
LIAEGKADVA DAELAKAEQL ANRTAGNISF AAALCRGWRG ACAYERGDLL TARQQLEFAV
PLIRRCGNIE IQRRLAVYLS RTCAALGDRA AAHDVLDELA ASRHGDSAGK TRTTVAAERI
RLLLGEEDVR QLRLVWAELD RFAAREGALP DRLLFDVEIS RLRMMIAEGR WGEAAGATPR
LAAWLERRQN SARPRAELLL VEAQIQLGRQ DAAANRLARQ ARVTGERFPM VFREAPDPVQ
ALLNGDWDGE GTGPETSDAL QLAATEHGLS AREGEILSLV IEGHKNKWIA RRLGLSEHTV
KWHVRNVLEK LGAPNRASAG AMVRHLELAS SRAAAGRR
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