Gene M446_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1716 
Symbol 
ID6135537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1928899 
End bp1929255 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content77% 
IMG OID641641974 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001768643 
Protein GI170739988 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.18507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG TCGTCCTCGC CCTCGCCGTG GCGCAGCCGG ACCTCGCGGA CCGGCTGGTC 
GCCCTGCTGG CGGACGTGCC GGGCCTGCGC CTGGCGCGGC CGGGCGAGGC GGCGGACGCG
GTGGTGACGC TGCCGCCCGG CAACGGCCCG GCACCCGATC CCGGGCTGAC GCCGCGGGAG
ATCGAGGTGC TCGGCCTCCT CGCCGAGGGC GCCTCGAACA AGGCCATCGC CCGGCGGCTC
GGCATCTCGG TCCACACGGC GAAGTTCCAC GTCGGCTCGC TCCTCGACAA GCTCGACGCG
ACGGGCCGCA CGGACGCGGT GGCGCACGCG GCGCGGCGCG GGGTGATCCA CCTGTGA
 
Protein sequence
MSEVVLALAV AQPDLADRLV ALLADVPGLR LARPGEAADA VVTLPPGNGP APDPGLTPRE 
IEVLGLLAEG ASNKAIARRL GISVHTAKFH VGSLLDKLDA TGRTDAVAHA ARRGVIHL