More than 300 homologs were found in PanDaTox collection
for query gene BBta_3765 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_3765  LuxR family transcriptional regulator  100 
 
 		 140 aa  270  5.000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.825501  normal  1 
 
 
-
 
NC_011894  Mnod_0475  transcriptional regulator, LuxR family  59.26 
 
 		 123 aa  135  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.282737  n/a   
 
 
-
 
NC_010511  M446_1716  LuxR family transcriptional regulator  59.09 
 
 		 118 aa  131  3e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.18507  normal  1 
 
 
-
 
NC_007964  Nham_1032  LuxR family transcriptional regulator  61.9 
 
 		 201 aa  79.3  0.00000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0799  response regulator receiver protein  59.09 
 
 		 204 aa  78.6  0.00000000000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.403434 
 
 
-
 
NC_009767  Rcas_1228  LuxR family transcriptional regulator  59.09 
 
 		 204 aa  77.8  0.00000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal  1 
 
 
-
 
NC_013526  Tter_2446  transcriptional regulator, LuxR family  58.57 
 
 		 188 aa  77  0.00000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0857  two component LuxR family transcriptional regulator  59.09 
 
 		 211 aa  75.5  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.00237341  n/a   
 
 
-
 
NC_011145  AnaeK_0902  two component transcriptional regulator, LuxR family  59.09 
 
 		 208 aa  75.5  0.0000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.154451  n/a   
 
 
-
 
NC_011891  A2cp1_0906  transcriptional regulator, LuxR family  59.09 
 
 		 208 aa  75.1  0.0000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.000000244022  n/a   
 
 
-
 
NC_009972  Haur_4091  LuxR family transcriptional regulator  48.65 
 
 		 191 aa  75.1  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0720604  n/a   
 
 
-
 
NC_009675  Anae109_0915  two component LuxR family transcriptional regulator  58.73 
 
 		 202 aa  73.9  0.0000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.000299753  normal  1 
 
 
-
 
NC_013595  Sros_3760  response regulator receiver protein  59.02 
 
 		 245 aa  70.5  0.000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.358522  normal  0.345814 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  57.81 
 
 		 209 aa  68.9  0.00000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  34.62 
 
 		 238 aa  67.8  0.00000000005  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_008825  Mpe_A0763  ATP-dependent transcriptional regulator-like protein protein  58.62 
 
 		 919 aa  67.8  0.00000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.422144  normal  1 
 
 
-
 
NC_008825  Mpe_A1686  two component LuxR family transcriptional regulator  60 
 
 		 240 aa  67.8  0.00000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.173725  normal  0.554277 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  46.88 
 
 		 228 aa  67  0.00000000008  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  34.62 
 
 		 250 aa  67  0.00000000008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_008699  Noca_4382  regulatory protein, LuxR  57.38 
 
 		 1006 aa  66.6  0.00000000009  Nocardioides sp. JS614  Bacteria  normal  0.172901  n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  54.84 
 
 		 206 aa  66.2  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  57.38 
 
 		 207 aa  65.9  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009806  Krad_4530  two component LuxR family transcriptional regulator  58.18 
 
 		 241 aa  65.1  0.0000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  hitchhiker  0.00470183 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  52.46 
 
 		 215 aa  65.1  0.0000000003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_1496  LuxR family transcriptional regulator  35.77 
 
 		 197 aa  65.1  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  57.14 
 
 		 232 aa  65.1  0.0000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  52.46 
 
 		 215 aa  64.7  0.0000000004  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  52.46 
 
 		 218 aa  64.7  0.0000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  32.65 
 
 		 210 aa  64.7  0.0000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  53.12 
 
 		 212 aa  64.3  0.0000000006  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_007413  Ava_0661  two component LuxR family transcriptional regulator  49.25 
 
 		 239 aa  64.3  0.0000000006  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000223942  normal  0.0624831 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  51.56 
 
 		 236 aa  64.3  0.0000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  50.82 
 
 		 215 aa  63.9  0.0000000007  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  50.82 
 
 		 215 aa  63.9  0.0000000007  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1771  LuxR family transcriptional regulator  53.23 
 
 		 228 aa  63.5  0.0000000008  Thermobispora bispora DSM 43833  Bacteria  normal  0.466335  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  52.46 
 
 		 231 aa  63.5  0.0000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2258  two component LuxR family transcriptional regulator  37.5 
 
 		 254 aa  63.5  0.0000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00245701 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  48.44 
 
 		 211 aa  63.5  0.0000000009  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  51.61 
 
 		 225 aa  63.5  0.0000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_011831  Cagg_2359  two component transcriptional regulator, LuxR family  54.84 
 
 		 247 aa  62.8  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0990205  decreased coverage  0.00133027 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  46.58 
 
 		 215 aa  63.2  0.000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  46.58 
 
 		 215 aa  63.2  0.000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  46.58 
 
 		 215 aa  63.2  0.000000001  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  46.58 
 
 		 215 aa  63.2  0.000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  47.62 
 
 		 209 aa  63.2  0.000000001  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_013757  Gobs_4942  two component transcriptional regulator, LuxR family  50 
 
 		 222 aa  62.8  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  50.82 
 
 		 214 aa  63.2  0.000000001  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013205  Aaci_2573  two component transcriptional regulator, LuxR family  52.24 
 
 		 221 aa  62.8  0.000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0970392  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  46.58 
 
 		 215 aa  63.2  0.000000001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  51.61 
 
 		 213 aa  62.8  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1767  transcriptional regulator, LuxR family  47.06 
 
 		 248 aa  62.8  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.426334 
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  50.79 
 
 		 209 aa  62.8  0.000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal  1 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  52.46 
 
 		 206 aa  62.8  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  50 
 
 		 227 aa  62  0.000000002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_1881  LuxR family transcriptional regulator  67.39 
 
 		 199 aa  62.4  0.000000002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_1626  two component LuxR family transcriptional regulator  50 
 
 		 194 aa  62.4  0.000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.947018 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  47.3 
 
 		 218 aa  62.4  0.000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  44.12 
 
 		 213 aa  62.8  0.000000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  47.83 
 
 		 212 aa  62  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  50 
 
 		 213 aa  61.6  0.000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  49.21 
 
 		 226 aa  62  0.000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  50.82 
 
 		 215 aa  61.6  0.000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.37 
 
 		 223 aa  62  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal  1 
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  51.56 
 
 		 212 aa  62  0.000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  48.39 
 
 		 210 aa  62  0.000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0139  GAF modulated transcriptional regulator, LuxR family  54.1 
 
 		 506 aa  61.2  0.000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  46.88 
 
 		 234 aa  61.2  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007511  Bcep18194_B1393  ATP-dependent transcription regulator LuxR  40.2 
 
 		 913 aa  61.6  0.000000004  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0710  two component LuxR family transcriptional regulator  50.79 
 
 		 240 aa  61.6  0.000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  52.17 
 
 		 213 aa  61.6  0.000000004  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013411  GYMC61_1243  transcriptional regulator, LuxR family  50 
 
 		 550 aa  61.2  0.000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010515  Bcenmc03_5576  LuxR family transcriptional regulator  49.23 
 
 		 239 aa  61.2  0.000000005  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000012464  normal  0.015154 
 
 
-
 
NC_007511  Bcep18194_B1052  LuxR family transcriptional regulator  49.23 
 
 		 239 aa  61.2  0.000000005  Burkholderia sp. 383  Bacteria  hitchhiker  0.00000000445716  normal  0.182523 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  47.54 
 
 		 210 aa  60.8  0.000000005  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_008010  Dgeo_2846  two component LuxR family transcriptional regulator  53.12 
 
 		 209 aa  61.2  0.000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_3643  LuxR family transcriptional regulator  49.23 
 
 		 239 aa  61.2  0.000000005  Burkholderia cenocepacia AU 1054  Bacteria  hitchhiker  0.00106494  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  46.88 
 
 		 234 aa  61.2  0.000000005  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_008543  Bcen2424_4724  LuxR family transcriptional regulator  49.23 
 
 		 239 aa  61.2  0.000000005  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000522863  hitchhiker  0.00659366 
 
 
-
 
NC_009767  Rcas_4428  two component LuxR family transcriptional regulator  50.79 
 
 		 231 aa  60.8  0.000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  33.59 
 
 		 211 aa  60.8  0.000000006  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_008576  Mmc1_3704  LuxR family transcriptional regulator  50.91 
 
 		 220 aa  60.8  0.000000006  Magnetococcus sp. MC-1  Bacteria  normal  0.0339608  normal  1 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  47.54 
 
 		 210 aa  60.8  0.000000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  48.39 
 
 		 206 aa  60.8  0.000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.82 
 
 		 226 aa  60.5  0.000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006274  BCZK1321  response regulator  50 
 
 		 210 aa  60.8  0.000000007  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  38.33 
 
 		 211 aa  60.5  0.000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  46.34 
 
 		 219 aa  60.5  0.000000007  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  43.94 
 
 		 217 aa  60.5  0.000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_011831  Cagg_0020  two component transcriptional regulator, LuxR family  50.79 
 
 		 229 aa  60.5  0.000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  54.1 
 
 		 216 aa  60.5  0.000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal  1 
 
 
-
 
NC_007492  Pfl01_3423  sensor protein  47.54 
 
 		 496 aa  60.5  0.000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_3277  transcriptional regulator, LuxR family  49.21 
 
 		 970 aa  60.5  0.000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.737282  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  32.63 
 
 		 237 aa  60.5  0.000000008  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  50.79 
 
 		 246 aa  60.5  0.000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
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