Gene Ndas_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1767 
Symbol 
ID9245617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2165954 
End bp2166700 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003679701 
Protein GI297560727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.426334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA CCCATGAGCA CGTCGACCAG CTTCCCGTTC CCTGCGCCCC GGAGAACGGC 
CCGCCCCTGA TCCCCCTGTG CGACCGCGAG CACGAGACCA TGGTGGTCGG GCCCGACTCG
CCCAGTACCG AGGCCACCCT GCGCGCGCTG CGCTCCATGG ACTGCACCGC GGGCGTCCTG
GCCCACTTCG ACTGTCCCGC CGAGGCCATC GCGCACCTGG GCCGGCGCGG ATGGGACTTC
GTCTTCCACG TCCGCCGGTC CGGCGCCGAG GACACGGCGG CCCTGCGCGA GGCGGCCCGG
GGGGCACGGG GCAAACACCT GTCCGTGCTG TCGGCGTCCG ACCGTTCACC GGGGTGCCCG
CTCAACGAGA CCGGCACGGA CGCCCTGGTC TCGGTGGACG AGCTGTCCCC GGCCGACCTG
CACTTCGCCT TCTGGCAGCT CGAACGGGGC CGCGTCTACC TTTCCCCCGG TCTGGTCGAC
CGGGCCGCCG CCCACGGGCG GCGCCTGCAC GGCGTGCCGG GCCCGGCCAC CCGCCTGACC
GAACGCGAAC GCCAGACGCT GGCCCTCATG GCGCGCGGGC TGGAGAACAA GGAGATCGCC
GCCCAGCTGC GGATCTCCCT GCACGGGGCC AAACGCAACG TCGCGCAGGT CCTGACCAAG
CTCGACTGCA CCAACCGGAC CATGGCCGTG GTCAAGGCGA TGAGCGGGAC GGCGTGCGGA
CTCGACCACC TGGCGCGGGG GAACTGA
 
Protein sequence
MTSTHEHVDQ LPVPCAPENG PPLIPLCDRE HETMVVGPDS PSTEATLRAL RSMDCTAGVL 
AHFDCPAEAI AHLGRRGWDF VFHVRRSGAE DTAALREAAR GARGKHLSVL SASDRSPGCP
LNETGTDALV SVDELSPADL HFAFWQLERG RVYLSPGLVD RAAAHGRRLH GVPGPATRLT
ERERQTLALM ARGLENKEIA AQLRISLHGA KRNVAQVLTK LDCTNRTMAV VKAMSGTACG
LDHLARGN