Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3423 |
Symbol | |
ID | 3713431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3902860 |
End bp | 3904350 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | sensor protein |
Protein accession | YP_349152 |
Protein GI | 77459645 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGGG ACGTCCTGAC CACCGAAACC AATCGCCGTC AATTGCAGCA GATCATTGCC GGCCTGTCCG ACGGGGTGAT TCTGCTGGAG CTCGACCAGA CGATTCTCTG GGCCAACGAA GCCGCGCTGG CGATGCATGG CGTCAGCCGG ATCGGCGAGC TGGGCAACAA CGCCGGGGAA TACGTCGAGC GCTTCAACCT GCGGTATCGC AACAACCACA CGCTGACGCC GGAGCAATAC CCGATCAGCC GTGTGGCGAC CGGTGAAACG TTCAGTGATG TGCTGGTGGA GGTTTCCCCG CGCAGCGATG AAGAACGCAC CTGGGTGCAC AGCGTGCGCA GCATGGTGCT GACCGATCGC GACGGCGACA TCGAGTCGCT GGTGCTGATC ATGAGCGACG TCACCGACTG GGCCAATGCC GAACAGCGCT TCGAAAAAAC CTTCAACGCC AACCCCGCGC CGGCGGTGAT CTGCCGCCTC AGCGATCTGC GTTACATCAA GGTCAATCCG GGTTTTCTGG AAATGACCGG TTACACCCGC GATCAGGTGA TCGGCGCTTC CACTTATGAG CTGGACATTC TCGAACAGGC CGAGCGCAAG GACCTGGCGA TCCAGCGCCT GCGCGATGTC GCGACGATCC CGCAGATGCA GGCCGAGCTG CGATTGCCGG ACGGTGGCAG TAAACAGGTG ATCGTCGCGG GGCAGCCGCT GGTGCTCAAT GACGAGGATT GCATGCTGTT TTCGTTCGTC GACATGGAGC TCAGGCATAA GGCCGAAGTC GCCCTGCGCC AGAGTGAAGA GCGGTTCGCC AAGGCCTTTC GCCTGACGCC GGTACCGATC CTGATTTGCA GCGCCGATGA GCAGCGGCTG ATCGACGTCA ATCAGGCCTT TCTCGATACC TTGGCTTACG AGAGCGACGA CGTGCTCGGC AAGACCGTCG CGCAACTGGA CTTCATCGAT GAACCGGCGG AACGCGCCCG GTTACTGGCG GCACTGGAGA AAACCGGCCG CGTTGACCGC GTCGATATGC GGATCCGCAG GAAAGACGCC GAGCTGCTGG AGTGCGCGAT GTCCGCCGAC ACCGTCAACA TCCAGGACGC GGTGTGCTAT CTGCTGGTGC TGATGGACAT CACCGAGCGC AAGCGCACCG AGCTTGAGCT GGTGGCGGCG ATTGAAGAAG TAATGAAGGA TGCATCCTGG TTCAGTCGGA CGTTGATCGA AAAGCTGGCC AATGTGAAGA AGGTCAACTC GCCGCAGCTG CCGAGCGTGT CGTTCACCGA TCTGACGGCC CGGGAGCGTG ATGTGCTGGC GCTGATCTGT GAGGGGCTGG CGGACAAGGA GATTGCTGCG CGGCTGAAGC TGGCGCCGAA CACGGTGCGC AATCATGTGG CGACGGTGTA TTCGAAGCTG GATGTGCACA GTCGAAGCGA GGCGATTGTC TGGGCTCGCG AGCGCGGGTT GTTTTCGGGG GGAGGTCGGG GGCAGCGGTA A
|
Protein sequence | MSRDVLTTET NRRQLQQIIA GLSDGVILLE LDQTILWANE AALAMHGVSR IGELGNNAGE YVERFNLRYR NNHTLTPEQY PISRVATGET FSDVLVEVSP RSDEERTWVH SVRSMVLTDR DGDIESLVLI MSDVTDWANA EQRFEKTFNA NPAPAVICRL SDLRYIKVNP GFLEMTGYTR DQVIGASTYE LDILEQAERK DLAIQRLRDV ATIPQMQAEL RLPDGGSKQV IVAGQPLVLN DEDCMLFSFV DMELRHKAEV ALRQSEERFA KAFRLTPVPI LICSADEQRL IDVNQAFLDT LAYESDDVLG KTVAQLDFID EPAERARLLA ALEKTGRVDR VDMRIRRKDA ELLECAMSAD TVNIQDAVCY LLVLMDITER KRTELELVAA IEEVMKDASW FSRTLIEKLA NVKKVNSPQL PSVSFTDLTA RERDVLALIC EGLADKEIAA RLKLAPNTVR NHVATVYSKL DVHSRSEAIV WARERGLFSG GGRGQR
|
| |