More than 300 homologs were found in PanDaTox collection
for query gene Franean1_4554 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_4554  short-chain dehydrogenase/reductase SDR  100 
 
 
218 aa  433  1e-120  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0052  short-chain dehydrogenase/reductase SDR  66.41 
 
 
259 aa  325  3e-88  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2852  short-chain dehydrogenase/reductase SDR  43.7 
 
 
256 aa  171  7.999999999999999e-42  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2944  short-chain dehydrogenase/reductase SDR  43.31 
 
 
256 aa  170  1e-41  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4547  hypothetical protein  94.19 
 
 
130 aa  166  2e-40  Frankia sp. EAN1pec  Bacteria  normal  0.688314  normal 
 
 
-
 
NC_007760  Adeh_2760  short-chain dehydrogenase/reductase SDR  42.91 
 
 
256 aa  166  4e-40  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.0058487  n/a   
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  41.63 
 
 
258 aa  165  5.9999999999999996e-40  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2033  short-chain dehydrogenase/reductase SDR  43.7 
 
 
256 aa  162  4.0000000000000004e-39  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00849421 
 
 
-
 
NC_013440  Hoch_5001  short-chain dehydrogenase/reductase SDR  40.16 
 
 
256 aa  159  2e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.46394 
 
 
-
 
NC_009719  Plav_0501  short-chain dehydrogenase/reductase SDR  34.78 
 
 
256 aa  140  9.999999999999999e-33  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.472606 
 
 
-
 
NC_014210  Ndas_2776  short-chain dehydrogenase/reductase SDR  39.52 
 
 
253 aa  136  2e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.627467 
 
 
-
 
NC_012560  Avin_12220  Short-chain dehydrogenase/reductase SDR  37.4 
 
 
250 aa  127  1.0000000000000001e-28  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1841  putative 3-ketoacyl-CoA reductase  37.96 
 
 
250 aa  125  4.0000000000000003e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2720  short-chain dehydrogenase/reductase SDR  36.82 
 
 
256 aa  124  8.000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1734  short-chain dehydrogenase/reductase SDR  35.63 
 
 
247 aa  121  7e-27  Acidiphilium cryptum JF-5  Bacteria  normal  0.798961  n/a   
 
 
-
 
NC_008146  Mmcs_2657  short-chain dehydrogenase/reductase SDR  35.6 
 
 
253 aa  119  4.9999999999999996e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2702  short-chain dehydrogenase/reductase SDR  35.6 
 
 
253 aa  119  4.9999999999999996e-26  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0205678 
 
 
-
 
NC_009077  Mjls_2687  short-chain dehydrogenase/reductase SDR  35.6 
 
 
253 aa  119  4.9999999999999996e-26  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1422  short-chain dehydrogenase/reductase SDR  34 
 
 
253 aa  118  6e-26  Acidiphilium cryptum JF-5  Bacteria  normal  0.182902  n/a   
 
 
-
 
NC_007777  Francci3_1239  short-chain dehydrogenase/reductase SDR  35.29 
 
 
259 aa  115  3.9999999999999997e-25  Frankia sp. CcI3  Bacteria  normal  normal  0.198291 
 
 
-
 
NC_007925  RPC_3013  short-chain dehydrogenase/reductase SDR  33.2 
 
 
253 aa  115  3.9999999999999997e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.47277 
 
 
-
 
NC_009511  Swit_2272  short-chain dehydrogenase/reductase SDR  33.6 
 
 
253 aa  115  5e-25  Sphingomonas wittichii RW1  Bacteria  normal  0.851754  normal  0.710684 
 
 
-
 
NC_003910  CPS_1680  short chain dehydrogenase/reductase family oxidoreductase  33.2 
 
 
251 aa  113  3e-24  Colwellia psychrerythraea 34H  Bacteria  normal  0.447885  n/a   
 
 
-
 
NC_009719  Plav_0483  short-chain dehydrogenase/reductase SDR  29.77 
 
 
262 aa  113  3e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2609  short-chain dehydrogenase/reductase SDR  34.4 
 
 
250 aa  113  3e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.328906 
 
 
-
 
NC_007958  RPD_4287  short-chain dehydrogenase/reductase SDR  32.55 
 
 
253 aa  110  1.0000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00908488 
 
 
-
 
NC_008463  PA14_10840  putative dehydrogenase  34.8 
 
 
250 aa  109  3e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000000000391035  normal 
 
 
-
 
NC_013525  Tter_0758  short-chain dehydrogenase/reductase SDR  32.94 
 
 
262 aa  108  5e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_5862  putative 3-ketoacyl-CoA reductase  33.6 
 
 
251 aa  108  7.000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2670  short-chain dehydrogenase/reductase SDR  32.4 
 
 
253 aa  107  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.243755  n/a   
 
 
-
 
NC_009441  Fjoh_4926  short-chain dehydrogenase/reductase SDR  31.02 
 
 
250 aa  106  2e-22  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1540  short-chain dehydrogenase/reductase SDR  33.61 
 
 
267 aa  107  2e-22  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.239754  n/a   
 
 
-
 
NC_009427  Saro_3486  short-chain dehydrogenase/reductase SDR  32.52 
 
 
253 aa  106  3e-22  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3316  short-chain dehydrogenase/reductase SDR  34.4 
 
 
253 aa  105  4e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3184  short-chain dehydrogenase/reductase SDR  33.2 
 
 
249 aa  104  1e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0196402  normal  0.84005 
 
 
-
 
NC_008699  Noca_3863  3-ketoacyl-(acyl-carrier-protein) reductase  36.03 
 
 
250 aa  104  1e-21  Nocardioides sp. JS614  Bacteria  normal  0.385562  n/a   
 
 
-
 
NC_013922  Nmag_1055  short-chain dehydrogenase/reductase SDR  32.28 
 
 
258 aa  104  1e-21  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013131  Caci_3622  short-chain dehydrogenase/reductase SDR  33.08 
 
 
262 aa  102  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.154401  normal 
 
 
-
 
NC_013947  Snas_2913  short-chain dehydrogenase/reductase SDR  34.84 
 
 
247 aa  102  3e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.00331942  hitchhiker  0.00525068 
 
 
-
 
NC_008688  Pden_4822  short-chain dehydrogenase/reductase SDR  34.3 
 
 
253 aa  103  3e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.237012  normal  0.451819 
 
 
-
 
NC_014210  Ndas_2918  short-chain dehydrogenase/reductase SDR  33.47 
 
 
251 aa  103  3e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.154844 
 
 
-
 
NC_009427  Saro_3749  short chain dehydrogenase  34.39 
 
 
254 aa  102  6e-21  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0698  sorbitol-6-phosphate dehydrogenase  29.69 
 
 
259 aa  101  7e-21  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00117968  n/a   
 
 
-
 
NC_010676  Bphyt_5751  short-chain dehydrogenase/reductase SDR  31.47 
 
 
254 aa  101  8e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0937136  normal 
 
 
-
 
NC_013159  Svir_16710  3-ketoacyl-(acyl-carrier-protein) reductase  35.63 
 
 
250 aa  101  9e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0156  short-chain dehydrogenase/reductase SDR  29.53 
 
 
253 aa  100  1e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000282185  n/a   
 
 
-
 
NC_009921  Franean1_3592  short-chain dehydrogenase/reductase SDR  32.53 
 
 
286 aa  100  2e-20  Frankia sp. EAN1pec  Bacteria  normal  normal  0.894525 
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  31.37 
 
 
258 aa  100  2e-20  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011004  Rpal_2453  short-chain dehydrogenase/reductase SDR  33.86 
 
 
249 aa  99.4  3e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.728081  n/a   
 
 
-
 
NC_009972  Haur_2614  short-chain dehydrogenase/reductase SDR  28.11 
 
 
257 aa  99.8  3e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.042976  n/a   
 
 
-
 
NC_009077  Mjls_1473  short-chain dehydrogenase/reductase SDR  31.47 
 
 
249 aa  99.4  3e-20  Mycobacterium sp. JLS  Bacteria  normal  0.162054  normal 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  30.43 
 
 
250 aa  99  4e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_2475  3-ketoacyl-(acyl-carrier-protein) reductase  34.84 
 
 
258 aa  99  5e-20  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000418459  decreased coverage  0.00157029 
 
 
-
 
NC_013205  Aaci_0216  short-chain dehydrogenase/reductase SDR  30.15 
 
 
260 aa  99  5e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0696  glucose 1-dehydrogenase  32.28 
 
 
252 aa  98.6  6e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3481  3-ketoacyl-(acyl-carrier-protein) reductase  31.4 
 
 
259 aa  98.6  6e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.187301  normal  0.768221 
 
 
-
 
NC_007963  Csal_2371  short-chain dehydrogenase/reductase SDR  32.79 
 
 
244 aa  98.6  6e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0097  short-chain dehydrogenase/reductase SDR  33.61 
 
 
262 aa  98.2  8e-20  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1783  short-chain dehydrogenase/reductase SDR  33.2 
 
 
247 aa  97.4  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0185042  normal  0.0937687 
 
 
-
 
NC_007333  Tfu_1682  3-ketoacyl-(acyl-carrier-protein) reductase  34.26 
 
 
252 aa  97.8  1e-19  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2849  glucose 1-dehydrogenase  34.92 
 
 
245 aa  97.4  1e-19  Frankia sp. CcI3  Bacteria  normal  normal  0.753993 
 
 
-
 
NC_013037  Dfer_1528  short-chain dehydrogenase/reductase SDR  31.3 
 
 
246 aa  97.4  1e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.606354  normal 
 
 
-
 
NC_009675  Anae109_3255  short-chain dehydrogenase/reductase SDR  31.25 
 
 
250 aa  97.8  1e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1992  short-chain dehydrogenase/reductase SDR  32.17 
 
 
362 aa  97.8  1e-19  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00359465  normal  0.191358 
 
 
-
 
NC_010681  Bphyt_1428  short-chain dehydrogenase/reductase SDR  33.33 
 
 
247 aa  96.7  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3206  short-chain dehydrogenase/reductase SDR  30.43 
 
 
255 aa  97.1  2e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1925  short-chain dehydrogenase/reductase SDR  30.62 
 
 
288 aa  96.7  2e-19  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2034  short-chain dehydrogenase/reductase SDR  33.07 
 
 
256 aa  97.1  2e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1344  3-oxoacyl-(acyl-carrier-protein) reductase  34.66 
 
 
246 aa  97.1  2e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.118162  n/a   
 
 
-
 
NC_008705  Mkms_1498  short-chain dehydrogenase/reductase SDR  30.62 
 
 
256 aa  96.7  2e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1303  short-chain dehydrogenase/reductase SDR  33.88 
 
 
243 aa  96.7  2e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5197  short-chain dehydrogenase/reductase SDR  30.8 
 
 
251 aa  96.7  2e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3747  short-chain dehydrogenase/reductase SDR  32.66 
 
 
254 aa  96.3  3e-19  Ralstonia pickettii 12D  Bacteria  normal  0.191543  normal 
 
 
-
 
NC_013132  Cpin_1759  short-chain dehydrogenase/reductase SDR  28.63 
 
 
250 aa  96.3  3e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.880714  normal 
 
 
-
 
NC_009565  TBFG_11957  short chain dehydrogenase  29.96 
 
 
255 aa  96.3  3e-19  Mycobacterium tuberculosis F11  Bacteria  normal  0.0556392  normal  0.717734 
 
 
-
 
NC_010678  Rpic_4824  short-chain dehydrogenase/reductase SDR  32.66 
 
 
254 aa  96.3  3e-19  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  30.95 
 
 
264 aa  96.3  3e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2788  short-chain dehydrogenase/reductase SDR  32.52 
 
 
254 aa  96.3  4e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.743418 
 
 
-
 
NC_007953  Bxe_C0610  putative short-chain dehydrogenase/reductase  30.5 
 
 
286 aa  95.9  4e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0678259 
 
 
-
 
NC_008048  Sala_0883  short-chain dehydrogenase/reductase SDR  28.79 
 
 
264 aa  96.3  4e-19  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_5148  short-chain dehydrogenase/reductase SDR  32.8 
 
 
253 aa  96.3  4e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.398999  normal  0.903635 
 
 
-
 
NC_013385  Adeg_0958  3-oxoacyl-(acyl-carrier-protein) reductase  32.4 
 
 
247 aa  95.9  5e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4233  short-chain dehydrogenase/reductase SDR  30.71 
 
 
257 aa  95.5  5e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1751  Short-chain dehydrogenase/reductase SDR  30.71 
 
 
257 aa  95.5  6e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_013922  Nmag_1392  short-chain dehydrogenase/reductase SDR  32.57 
 
 
261 aa  95.5  6e-19  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_014158  Tpau_1853  short-chain dehydrogenase/reductase SDR  32.93 
 
 
251 aa  95.5  6e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_007958  RPD_3548  short-chain dehydrogenase/reductase SDR  31.37 
 
 
257 aa  95.1  7e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3769  3-ketoacyl-(acyl-carrier-protein) reductase  30.23 
 
 
259 aa  95.1  7e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.988142 
 
 
-
 
NC_008146  Mmcs_2623  short-chain dehydrogenase/reductase SDR  32.27 
 
 
284 aa  95.1  7e-19  Mycobacterium sp. MCS  Bacteria  normal  0.795257  n/a   
 
 
-
 
NC_008705  Mkms_2667  short-chain dehydrogenase/reductase SDR  32.27 
 
 
284 aa  95.1  7e-19  Mycobacterium sp. KMS  Bacteria  normal  0.459641  normal  0.940814 
 
 
-
 
NC_008726  Mvan_5573  short chain dehydrogenase  31.1 
 
 
259 aa  95.1  8e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.590665  normal 
 
 
-
 
NC_008752  Aave_1089  short-chain dehydrogenase/reductase SDR  33.73 
 
 
259 aa  95.1  8e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_009077  Mjls_2812  short-chain dehydrogenase/reductase SDR  29.88 
 
 
255 aa  95.1  8e-19  Mycobacterium sp. JLS  Bacteria  normal  0.199732  normal 
 
 
-
 
NC_008148  Rxyl_2394  short-chain dehydrogenase/reductase SDR  30.65 
 
 
270 aa  94.7  9e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.883346  n/a   
 
 
-
 
NC_010505  Mrad2831_1822  short-chain dehydrogenase/reductase SDR  33.33 
 
 
256 aa  94.4  1e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.675058  normal  0.0165705 
 
 
-
 
NC_008146  Mmcs_2785  short-chain dehydrogenase/reductase SDR  29.88 
 
 
255 aa  94  1e-18  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  32.68 
 
 
257 aa  94  1e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_008705  Mkms_2829  short-chain dehydrogenase/reductase SDR  29.88 
 
 
255 aa  94  1e-18  Mycobacterium sp. KMS  Bacteria  normal  0.150517  normal  0.215397 
 
 
-
 
NC_009077  Mjls_2652  short-chain dehydrogenase/reductase SDR  32.27 
 
 
284 aa  94.7  1e-18  Mycobacterium sp. JLS  Bacteria  normal  0.690053  normal 
 
 
-
 
NC_013757  Gobs_1965  short-chain dehydrogenase/reductase SDR  32 
 
 
253 aa  93.6  2e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.164204  n/a   
 
 
-
 
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