| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3592 |
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| Symbol | |
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| ID | 5671961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4254950 |
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| End bp | 4255810 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242478 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507898 |
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| Protein GI | 158315390 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.894525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TGAGCATGAC CCACCTGAGC ATGACCCACC TGAGCATGAC CGAGCAGAGC
ACCACCGACC AGACCGGGAA CGTGACCGGG AGACAGGTGC TCAAGGGGCG TGTCGCGCTG
GTCACCGGCG GGTCCCGGGG CATCGGCCTC GGCATCGCGA GGGCGTTCCG CGCCGAGGGG
GCGCACGTGG TCATCTGCGC GCGCAAGGCC GAGGGCGTGG CGGCCGCGGC GAAGGAGCTG
CTGGCGGGCG AGGGCGACGG CGAGGTGCTC GGGCTCGTGG CGAACGCCGG TGAGCCCGAG
CACGCCGAGC GGACGGTCAC GGCGGCGCTC GAGCGCCTCG GCCGGCTCGA CATACTGGTC
AACAATGCCG CCACCAACCC CTACATGGGG CCGCTCGTCG ACATCGACCT GCCGCGCGCG
GAGAAGACCA CCAAGGTCAA CCAGATCGGG ATGCTCGCGT GGATCCGGTA CGCGGTCCGC
GGCTGGATGG TCGAGCACGG CGGCTCGGTT ATCAACATCG CGTCAGTCGG CGGGCTGATC
GTCGACCCGG GCATTGGCTT CTACAACGCC ACCAAGGCGG CCATCCTGCT CATGACACGT
CAGCTCGCCT ACGAACTCGG CCCGGCCGTC CGGGTGAACG CTCTCGCACC CGGCGTCATC
AAGACCGAGC TGGCCCGCGC GGTGTGGGAG GTCCGCGAGC CTGTGCTCAC CGCCCAGCTC
CCGCTGCGGC GGCTCGGCAC AGTGCAGGAC GTCGCCAACG CGGCTGTGTT CTTCGCGAGC
GACGCGTCGT CGTGGATCAC CGGCCAGACC CTGGTGCTCG ACGGCGGCGC GCTCACCCTG
CCCATCGCGC CGGGCCCGTG A
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| Protein sequence | MTDLSMTHLS MTHLSMTEQS TTDQTGNVTG RQVLKGRVAL VTGGSRGIGL GIARAFRAEG
AHVVICARKA EGVAAAAKEL LAGEGDGEVL GLVANAGEPE HAERTVTAAL ERLGRLDILV
NNAATNPYMG PLVDIDLPRA EKTTKVNQIG MLAWIRYAVR GWMVEHGGSV INIASVGGLI
VDPGIGFYNA TKAAILLMTR QLAYELGPAV RVNALAPGVI KTELARAVWE VREPVLTAQL
PLRRLGTVQD VANAAVFFAS DASSWITGQT LVLDGGALTL PIAPGP
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