| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2670 |
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| Symbol | |
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| ID | 6410333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2900407 |
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| End bp | 2901168 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712546 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001991655 |
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| Protein GI | 192291050 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.243755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGG GATTGAAGGG CGCCAAGGTA CTGGTCACCG GCGGCACCAA AGGCATCGGG
CGCGCGATTG CCGACACCTT CGCGGCAGAA GGTGCGCATA TCGGCCTGTG CGCGCGCAAT
GCAGCCGAGG TCGACGGTGC GGTCGCTACG CTGAAGGCGA CGGGCGTGTC GGCCTTCGGT
GGCGCGGTCG ATGTGTCCGA TGGCCCGGGC TTGAAGACCT GGGTCGCCGA CATGGCGGCC
GAGCTCGGCG GCATCGACGT CGTTGTCGCC AATGTCAGCG CGCTGGCGAT CGGCTCGGAC
GAGGATAGCT GGGCCAAGGG CTTCGCCACC GACATGATGG GCACGGTGCG GCTGGTCGAC
GCCGCGATGC CGTATCTCGA GCAGAGTCAG CAGCCCGCGA TCGTCACCGT CTCCAGCGTC
TCGGGACGGG AGATCGATTT CGCTGCCGGC CCGTATGGGA CCTTCAAGGC GGCGATCATC
CACTACACCC AGGGTCTCGC GTACCAGCTC GCCGGCAAGG GCATCCGTGC CAACACGGTC
TCGCCCGGCA ATACTTATTT CGAGGGTGGT GTGTGGGAGC AGATCAAGAA CGGGAATCCT
GATCTCTACA ACACCGCGCT GGCGCTGAAT CCAACAGGGC GGATGGGGAC GCCGCAGGAG
ATGGCGAACG CCGCGGTCTT CCTTGCCAGC CGTGCCGCCA GCTTTATCAC TGGTACCAAT
GTGGTGGTCG ACGGTGCGCT CACCCGCGGC GTGCAGTTCT GA
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| Protein sequence | MDLGLKGAKV LVTGGTKGIG RAIADTFAAE GAHIGLCARN AAEVDGAVAT LKATGVSAFG
GAVDVSDGPG LKTWVADMAA ELGGIDVVVA NVSALAIGSD EDSWAKGFAT DMMGTVRLVD
AAMPYLEQSQ QPAIVTVSSV SGREIDFAAG PYGTFKAAII HYTQGLAYQL AGKGIRANTV
SPGNTYFEGG VWEQIKNGNP DLYNTALALN PTGRMGTPQE MANAAVFLAS RAASFITGTN
VVVDGALTRG VQF
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