| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1089 |
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| Symbol | |
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| ID | 4666178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1191477 |
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| End bp | 1192256 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822287 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_969459 |
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| Protein GI | 120609781 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0332234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAAG GACGCCTCGC AGGCCGCAAG GCCCTCGTCA CCGGCAGCAC ACAGGGCATC
GGCGCCGCCA TCGCGCTGCG GCTCGCGCAG GACGGTGCGG ACGTCGTTCT CAACGGGCGC
GATCCCGATG GTGCGCCCGG CGGGCTCATC GAGTGCATCG CCGCGCTCGG GTGCCGCGCG
GTGTACGTGG CCGCGGACCT GAGCAGCGGC GCGGCCGAAG CGGGCCGGCT GGTGGACGAG
GCCGCGCAGG CGCTCCGCGG GCTGGACATC CTGGTGAACA ATGCGGGCGT GGAACGTCGC
GCCGATTTCT GGGACGTGAC CGAGGAAGAC TACGACCTCG TGATGGACAC CAACGTGAAG
GGCCTGTTCT TCGCCACGCA GGCCTTCGTG CGGCACCTGC GCGCGCGCAA GGACGAGGGC
GCCATCGTCA ACATCAGTTC GGTGCACGAG GAGATCGCCT TCCCGCATTT CGCTTCGTAC
TGCGCGAGCA AGGGCGCGCT GCGCATGCTG GCGCGCAACC TCGCGAGCGA ACTCGCCCCG
CTGGGCATCC GCGTCAACAA CGTCGCGCCG GGTGCCATCG CCACCCCGAT CAACGCACAA
CTGATGGACA ACCCGGAGCA GTTGCGCGCG CTCAATGCGC AGATCCCCCT GGGCCGCATG
GGCCAGCCCG AGGACGTGGC CGGCCTGGTG GCCTTCCTGT CGGGAGACGA GGCGCGCTAC
ATCACAGGCG GCACCCACTT CGTGGACGGT GGCCTGACCT ACCACTACAC CGAGCAATAG
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| Protein sequence | MVQGRLAGRK ALVTGSTQGI GAAIALRLAQ DGADVVLNGR DPDGAPGGLI ECIAALGCRA
VYVAADLSSG AAEAGRLVDE AAQALRGLDI LVNNAGVERR ADFWDVTEED YDLVMDTNVK
GLFFATQAFV RHLRARKDEG AIVNISSVHE EIAFPHFASY CASKGALRML ARNLASELAP
LGIRVNNVAP GAIATPINAQ LMDNPEQLRA LNAQIPLGRM GQPEDVAGLV AFLSGDEARY
ITGGTHFVDG GLTYHYTEQ
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