| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1473 |
|---|
| Symbol | |
|---|
| ID | 4877208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1581912 |
|---|
| End bp | 1582661 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640138781 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001069765 |
|---|
| Protein GI | 126434074 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.162054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTCG CGAACAAGGT AACCCTCGTC ACCGGCGGGA GCGCGGGCCT TGGCCTGGCG
ATTGCCCAGA GATTCGGCAG TGAAGGCGCC CACGTCTATA TCACGGGGCG ACGGCGGGAG
GCGCTCGAAG CCGCGAGGGC TTCCATCGAG GGACGTGTCA CGGCGCTCAC CGCGGACGCT
ACGGTCCCCG GTGATCTCGA CCTTCTGATC GAGACGATCC GCCGGGAGAG CGGGCACCTC
GACGTCGTCG TCGCCAACGC CGGGAGCATC GAGCGGATGA ACTTCGGGGA CGTGACCGAG
GAACATTTCG ACCGCACCTT CGACCTCAAC GCCCGCGGCA CACTGTTCAC CGTCCAGAAG
GCGCTGCCGC TTCTACGAAC AGGCGGCTCG ATAGTCCTGC TGGGCTCGGT CACTGCGCTC
CAGGGGCACC CCGGGGCGGG GACTTACAGC GCGGCGAAGG CTGCCGTACG CTCCTACGCG
CGCACGTGGT CAGCAGAGTT CGGCGACAAG GGCCTCCGGG TCAACGTGCT GAGCCCGGGG
CCGATCGACA CGCCCATCAT CGACGGCCAG GCCGACTACT TCGGTCAAGA CCCAGTAGCT
CTCCGAGCCC AGATGAGCAC CCTTGTCCCG ATGGGCCGCC TCGGACGTCC CGAGGAGATC
GCTAATGGTG CACTGTTTCT CGCCTCGGAC GAGAGCAGTT TCATGACGGG GGCAGAACTT
TGCATCGACG GCGGTATGGC TCGGGTATAG
|
|---|
| Protein sequence | MRLANKVTLV TGGSAGLGLA IAQRFGSEGA HVYITGRRRE ALEAARASIE GRVTALTADA
TVPGDLDLLI ETIRRESGHL DVVVANAGSI ERMNFGDVTE EHFDRTFDLN ARGTLFTVQK
ALPLLRTGGS IVLLGSVTAL QGHPGAGTYS AAKAAVRSYA RTWSAEFGDK GLRVNVLSPG
PIDTPIIDGQ ADYFGQDPVA LRAQMSTLVP MGRLGRPEEI ANGALFLASD ESSFMTGAEL
CIDGGMARV
|
|---|
| |