More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_3316 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_3316  short-chain dehydrogenase/reductase SDR  100 
 
 
253 aa  492  9.999999999999999e-139  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1422  short-chain dehydrogenase/reductase SDR  72.33 
 
 
253 aa  373  1e-102  Acidiphilium cryptum JF-5  Bacteria  normal  0.182902  n/a   
 
 
-
 
NC_011004  Rpal_2670  short-chain dehydrogenase/reductase SDR  70.75 
 
 
253 aa  361  7.0000000000000005e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.243755  n/a   
 
 
-
 
NC_007958  RPD_4287  short-chain dehydrogenase/reductase SDR  68.77 
 
 
253 aa  360  1e-98  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00908488 
 
 
-
 
NC_007925  RPC_3013  short-chain dehydrogenase/reductase SDR  69.17 
 
 
253 aa  353  2e-96  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.47277 
 
 
-
 
NC_010676  Bphyt_5751  short-chain dehydrogenase/reductase SDR  65.35 
 
 
254 aa  320  9.999999999999999e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0937136  normal 
 
 
-
 
NC_008146  Mmcs_2657  short-chain dehydrogenase/reductase SDR  64.03 
 
 
253 aa  308  6.999999999999999e-83  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2702  short-chain dehydrogenase/reductase SDR  64.03 
 
 
253 aa  308  6.999999999999999e-83  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0205678 
 
 
-
 
NC_009077  Mjls_2687  short-chain dehydrogenase/reductase SDR  64.03 
 
 
253 aa  308  6.999999999999999e-83  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1965  short-chain dehydrogenase/reductase SDR  62.85 
 
 
253 aa  305  7e-82  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.164204  n/a   
 
 
-
 
NC_009338  Mflv_5148  short-chain dehydrogenase/reductase SDR  64.43 
 
 
253 aa  300  1e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.398999  normal  0.903635 
 
 
-
 
NC_008726  Mvan_1185  short-chain dehydrogenase/reductase SDR  61.66 
 
 
242 aa  296  2e-79  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_12220  Short-chain dehydrogenase/reductase SDR  62.85 
 
 
250 aa  295  4e-79  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_10840  putative dehydrogenase  58.89 
 
 
250 aa  282  3.0000000000000004e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000000000391035  normal 
 
 
-
 
NC_010501  PputW619_2609  short-chain dehydrogenase/reductase SDR  57.71 
 
 
250 aa  279  2e-74  Pseudomonas putida W619  Bacteria  normal  normal  0.328906 
 
 
-
 
NC_009485  BBta_5862  putative 3-ketoacyl-CoA reductase  58.57 
 
 
251 aa  270  1e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0501  short-chain dehydrogenase/reductase SDR  53.31 
 
 
256 aa  269  2.9999999999999997e-71  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.472606 
 
 
-
 
NC_009427  Saro_3486  short-chain dehydrogenase/reductase SDR  46.27 
 
 
253 aa  216  4e-55  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1841  putative 3-ketoacyl-CoA reductase  49.19 
 
 
250 aa  204  1e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2272  short-chain dehydrogenase/reductase SDR  42.29 
 
 
253 aa  197  1.0000000000000001e-49  Sphingomonas wittichii RW1  Bacteria  normal  0.851754  normal  0.710684 
 
 
-
 
NC_014210  Ndas_2776  short-chain dehydrogenase/reductase SDR  45.97 
 
 
253 aa  188  5.999999999999999e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.627467 
 
 
-
 
NC_009484  Acry_1734  short-chain dehydrogenase/reductase SDR  43.93 
 
 
247 aa  184  1.0000000000000001e-45  Acidiphilium cryptum JF-5  Bacteria  normal  0.798961  n/a   
 
 
-
 
NC_011071  Smal_1727  short-chain dehydrogenase/reductase SDR  37.86 
 
 
279 aa  154  2e-36  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.507862  normal  0.704803 
 
 
-
 
NC_009921  Franean1_0052  short-chain dehydrogenase/reductase SDR  36.47 
 
 
259 aa  141  9e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2852  short-chain dehydrogenase/reductase SDR  42.19 
 
 
256 aa  140  1.9999999999999998e-32  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2944  short-chain dehydrogenase/reductase SDR  42.08 
 
 
256 aa  140  3e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  36.54 
 
 
258 aa  138  7.999999999999999e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2760  short-chain dehydrogenase/reductase SDR  42.02 
 
 
256 aa  135  6.0000000000000005e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.0058487  n/a   
 
 
-
 
NC_011761  AFE_2225  glucose 1-dehydrogenase, putative  38.04 
 
 
261 aa  133  1.9999999999999998e-30  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1879  short-chain dehydrogenase/reductase SDR  38.04 
 
 
261 aa  133  1.9999999999999998e-30  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.828765 
 
 
-
 
NC_009675  Anae109_2033  short-chain dehydrogenase/reductase SDR  39.45 
 
 
256 aa  132  3.9999999999999996e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00849421 
 
 
-
 
NC_013037  Dfer_2333  short-chain dehydrogenase/reductase SDR  39.44 
 
 
248 aa  132  5e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.881664  normal 
 
 
-
 
NC_013730  Slin_5790  short-chain dehydrogenase/reductase SDR  36.55 
 
 
256 aa  132  7.999999999999999e-30  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0601767 
 
 
-
 
NC_010338  Caul_2720  short-chain dehydrogenase/reductase SDR  40.31 
 
 
256 aa  130  2.0000000000000002e-29  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0311  Short-chain dehydrogenase/reductase SDR  38.26 
 
 
262 aa  130  3e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  34.26 
 
 
254 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_013440  Hoch_5001  short-chain dehydrogenase/reductase SDR  41.09 
 
 
256 aa  129  5.0000000000000004e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.46394 
 
 
-
 
NC_010644  Emin_0659  3-oxoacyl-(acyl-carrier-protein) reductase  33.07 
 
 
245 aa  125  6e-28  Elusimicrobium minutum Pei191  Bacteria  normal  0.372694  normal 
 
 
-
 
NC_010681  Bphyt_3412  short chain dehydrogenase  38.04 
 
 
258 aa  125  6e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0947163  normal  0.165905 
 
 
-
 
NC_010622  Bphy_2616  short chain dehydrogenase  36.96 
 
 
258 aa  125  6e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0112  short-chain dehydrogenase/reductase SDR  32.33 
 
 
263 aa  125  7e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  38.46 
 
 
254 aa  125  9e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_007951  Bxe_A0545  short chain dehydrogenase  36 
 
 
258 aa  124  1e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.379815  normal  0.424655 
 
 
-
 
NC_010322  PputGB1_1794  3-ketoacyl-(acyl-carrier-protein) reductase  36.03 
 
 
257 aa  124  1e-27  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1138  short-chain dehydrogenase/reductase SDR  40.54 
 
 
255 aa  124  2e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  38.06 
 
 
254 aa  123  2e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3046  short-chain dehydrogenase/reductase SDR  37.6 
 
 
252 aa  123  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1658  short-chain dehydrogenase/reductase SDR  36.36 
 
 
247 aa  122  4e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0249  3-ketoacyl-(acyl-carrier-protein) reductase  35.2 
 
 
258 aa  122  4e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0279472  normal 
 
 
-
 
NC_011369  Rleg2_3473  short chain dehydrogenase  33.6 
 
 
259 aa  122  5e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.639698 
 
 
-
 
NC_013131  Caci_0162  short-chain dehydrogenase/reductase SDR  36.1 
 
 
267 aa  122  6e-27  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00177695  normal 
 
 
-
 
NC_009441  Fjoh_3849  short chain dehydrogenase  35.66 
 
 
260 aa  122  8e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0851  short-chain dehydrogenase/reductase SDR  34.25 
 
 
254 aa  121  9.999999999999999e-27  Caulobacter sp. K31  Bacteria  normal  0.0597888  normal  0.281853 
 
 
-
 
NC_011004  Rpal_0963  short-chain dehydrogenase/reductase SDR  35.89 
 
 
258 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  37.35 
 
 
249 aa  120  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2698  short-chain dehydrogenase/reductase SDR  36.74 
 
 
267 aa  120  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.257261 
 
 
-
 
NC_012857  Rpic12D_4637  short chain dehydrogenase  33.96 
 
 
269 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  0.0597104  normal  0.0798604 
 
 
-
 
NC_010678  Rpic_4505  short chain dehydrogenase  33.96 
 
 
269 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  0.15196  normal  0.998314 
 
 
-
 
NC_010830  Aasi_0105  3-oxoacyl-(acyl-carrier-protein) reductase  34.15 
 
 
248 aa  120  1.9999999999999998e-26  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_012854  Rleg_6325  short-chain dehydrogenase/reductase SDR  38.19 
 
 
254 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.251484  normal 
 
 
-
 
NC_009439  Pmen_3205  short-chain dehydrogenase/reductase SDR  39.2 
 
 
245 aa  120  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.155975 
 
 
-
 
NC_009654  Mmwyl1_1518  short chain dehydrogenase  34.65 
 
 
254 aa  119  3.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  0.570528  normal  0.0138518 
 
 
-
 
NC_011761  AFE_1857  glucose 1-dehydrogenase, putative  35.97 
 
 
261 aa  119  3.9999999999999996e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.637675  n/a   
 
 
-
 
NC_011206  Lferr_1535  short-chain dehydrogenase/reductase SDR  35.97 
 
 
261 aa  119  3.9999999999999996e-26  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0579067  normal  0.028281 
 
 
-
 
NC_012850  Rleg_3769  3-ketoacyl-(acyl-carrier-protein) reductase  36.22 
 
 
259 aa  119  6e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.988142 
 
 
-
 
NC_010505  Mrad2831_0334  3-ketoacyl-(acyl-carrier-protein) reductase  38.91 
 
 
268 aa  118  7.999999999999999e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5573  short chain dehydrogenase  36.18 
 
 
259 aa  118  9e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.590665  normal 
 
 
-
 
NC_009719  Plav_0548  short-chain dehydrogenase/reductase SDR  33.59 
 
 
261 aa  118  9e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0190  short chain dehydrogenase  36.8 
 
 
259 aa  117  9.999999999999999e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0199  short chain dehydrogenase  36.8 
 
 
259 aa  117  9.999999999999999e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1220  short chain dehydrogenase  36 
 
 
254 aa  117  9.999999999999999e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0140677 
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  36.05 
 
 
264 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0179  short chain dehydrogenase  36.4 
 
 
259 aa  118  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.521326 
 
 
-
 
NC_009921  Franean1_4459  short-chain dehydrogenase/reductase SDR  35.43 
 
 
272 aa  117  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_3485  short chain dehydrogenase  35.46 
 
 
269 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7245  Short-chain dehydrogenase/reductase  33.46 
 
 
267 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195647  normal  0.817799 
 
 
-
 
NC_007778  RPB_3121  Short-chain dehydrogenase/reductase SDR  35.19 
 
 
267 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.780645 
 
 
-
 
NC_009338  Mflv_1235  short chain dehydrogenase  36.51 
 
 
259 aa  117  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.183265  normal  0.0279411 
 
 
-
 
NC_009667  Oant_1136  short-chain dehydrogenase/reductase SDR  35.94 
 
 
249 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.399133  n/a   
 
 
-
 
NC_011004  Rpal_2058  short-chain dehydrogenase/reductase SDR  38.37 
 
 
246 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0273  short-chain dehydrogenase/reductase SDR  32.17 
 
 
254 aa  116  3e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4528  Short-chain dehydrogenase/reductase SDR  36.4 
 
 
258 aa  116  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.831809  normal 
 
 
-
 
NC_008148  Rxyl_3047  short-chain dehydrogenase/reductase SDR  36.29 
 
 
262 aa  116  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3298  short chain dehydrogenase  35.46 
 
 
259 aa  116  3e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2619  short-chain dehydrogenase/reductase SDR  31.8 
 
 
287 aa  116  3e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.38962  normal  0.0399907 
 
 
-
 
NC_008785  BMASAVP1_A0407  short chain dehydrogenase  35.46 
 
 
259 aa  116  3e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1267  short chain dehydrogenase  35.46 
 
 
259 aa  116  3e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2487  short chain dehydrogenase  35.46 
 
 
269 aa  116  3.9999999999999997e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0610  putative short-chain dehydrogenase/reductase  34.11 
 
 
286 aa  116  3.9999999999999997e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0678259 
 
 
-
 
NC_012850  Rleg_0121  short-chain dehydrogenase/reductase SDR  43.14 
 
 
246 aa  116  3.9999999999999997e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521218  normal 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  36.4 
 
 
258 aa  116  3.9999999999999997e-25  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_008786  Veis_3594  short-chain dehydrogenase/reductase SDR  34.52 
 
 
261 aa  116  3.9999999999999997e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.806821  normal  0.214566 
 
 
-
 
NC_010681  Bphyt_1098  short-chain dehydrogenase/reductase SDR  36 
 
 
249 aa  115  5e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4366  short-chain dehydrogenase/reductase SDR  35.48 
 
 
259 aa  115  5e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.534322  normal 
 
 
-
 
NC_010511  M446_0236  short-chain dehydrogenase/reductase SDR  34.12 
 
 
255 aa  115  5e-25  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00815339 
 
 
-
 
NC_008392  Bamb_6220  short-chain dehydrogenase/reductase SDR  33.73 
 
 
252 aa  115  5e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.621886  normal 
 
 
-
 
NC_010322  PputGB1_1428  3-ketoacyl-(acyl-carrier-protein) reductase  38.26 
 
 
249 aa  115  5e-25  Pseudomonas putida GB-1  Bacteria  normal  normal  0.596689 
 
 
-
 
NC_009074  BURPS668_3449  short chain dehydrogenase  35.46 
 
 
259 aa  115  5e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.93684  n/a   
 
 
-
 
NC_009076  BURPS1106A_3487  short chain dehydrogenase  35.46 
 
 
259 aa  115  5e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5059  short-chain dehydrogenase/reductase SDR  34.12 
 
 
266 aa  115  6e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
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