| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1727 |
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| Symbol | |
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| ID | 6475597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1938886 |
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| End bp | 1939725 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642730908 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002028114 |
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| Protein GI | 194365504 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.507862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.704803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGG ATCCGGCCAC GTCCGTGGGT CAGAGCCCCT CCGGGGATCT GACCCAAGAG
AAGGGTCGGA TCCCCGCAGG GGCTCCGATC CTCGATTTCA CCGGCCGCCG CGTGTTGATC
GCCGGCGGCA GCAAGGGCAT CGGTCGTGAA ATGGCGCTGG CGTTTGCCGG CGCCGGTGCG
CAGGTTTCGG TCTGCGCCCG AGGCCAGGTC GGTCTGGATG CACTGCGCGC CGATGCGCGG
GCGCAGAACT TCGAACTGCA TACGTTCTCC GCCGATCTGG CCGACGCTGG CCAGATCCAG
GCTTGGCTGC AAACAGCCGC CGACACACTC GGCGGCATCG ACGTGCTGGT CAACAACGCC
ACCGGCTATG GCATGGCCGA CGACGAGGAT GGCTGGGCGG CCAGCCTGCA GATCGATCTG
ATGGCCGCCG TTAGGGCCTC GCGCCTGGCC CTGCCCTGGC TGCGCGCATC CAGCGATGCC
TGCATTCTCA ACCTGTCGTC GATTGCCGCG CAGCAGCCGC GCCCCGGTGG CGCACCCTAC
GCCGCCGCCA AGGCCGCGCT GTCGCACTAC ACCACCTCGC AGGCACTGGC GCTGGCCAAG
GATCGGATCC GGGTCAATGC CATCGCACCG GGTTCGATCG AGTTCGATGA CGGCCTCTGG
GACCGCCGCC GCACCGAAGA TCCCGCCCTG TACCACGGTA CGCTGGCGAA GATTCCGTTC
GGCCGCTTCG GCCACCCGCG CGAGATCGCC GATGCCGCCC TGTTCCTGTG CTCGCCGCTG
GCGCGCTGGG TCACCGGCAG CGTGCTCAAC GTGGATGGCG GCCAGGTGTT GATGGGCTGA
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| Protein sequence | MATDPATSVG QSPSGDLTQE KGRIPAGAPI LDFTGRRVLI AGGSKGIGRE MALAFAGAGA
QVSVCARGQV GLDALRADAR AQNFELHTFS ADLADAGQIQ AWLQTAADTL GGIDVLVNNA
TGYGMADDED GWAASLQIDL MAAVRASRLA LPWLRASSDA CILNLSSIAA QQPRPGGAPY
AAAKAALSHY TTSQALALAK DRIRVNAIAP GSIEFDDGLW DRRRTEDPAL YHGTLAKIPF
GRFGHPREIA DAALFLCSPL ARWVTGSVLN VDGGQVLMG
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