| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3205 |
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| Symbol | |
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| ID | 5106534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3545313 |
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| End bp | 3546050 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504462 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001188690 |
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| Protein GI | 146308225 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.155975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCA CTGGCAAGCG CGCACTGGTA ACGGGAGGCT CTCGCGGTAT TGGCGCCGCG
ATTGCACAGG CCTTGGCTGC AGACGGCGCG GACGTTGCAA TCACTTATCT GCGCTCCGCT
GAGCAGGCAC AACACATTGT GGCTTCCATG GAAAAGATGG GTAGCCGTGG TTTGGCCATT
CAGGCCGACA GTGCTGATCC GGAGGCTGTC CAGCGGGCCG TCCGGGAGAC CGTCGATACG
CTGGGTGGCC TCGATATCCT CGTCAACAGC GCCGCCATCG GCTTGGCAGG ACCGGTCGCG
CAGGTCGACC TCGCAGAATT CCAGGCGATG ATGGATGTTA ATGTGCGCGG GCCGTTTGTG
GCGGCGCAAG CTGCAATACC CCACCTGAGC GAAGGCGGTC GTATCATTTC GATCGGGTCG
GCTTTGGCTG AGCGTGTCCC GTTTCCGGGT ATCACGGCTT ATGCCATGTC GAAGTCGGCA
CTTCTCTCGT TCACCCGTGG CCTGTCGCGT GAGCTGGGTC CGCAGGGCAT TACGGTCAAT
CTTGTCCTGC CCGGATCGAC TGATACTGAG GCGAATCCTG CCGATGGCGA AAGTGCTGAT
TTCCAGCGAG GTCTGACATC TATAGGGCGT TACGCCGAGC CGCGAGAGAT CGCCAACGCT
GTCGTATTTC TTGCCAGCCC TGCCGCGAAC ATGGTGACTG GCATCAGCCT GACGGTCGAC
GGCGGTGCGA ATGCATAG
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| Protein sequence | MNLTGKRALV TGGSRGIGAA IAQALAADGA DVAITYLRSA EQAQHIVASM EKMGSRGLAI
QADSADPEAV QRAVRETVDT LGGLDILVNS AAIGLAGPVA QVDLAEFQAM MDVNVRGPFV
AAQAAIPHLS EGGRIISIGS ALAERVPFPG ITAYAMSKSA LLSFTRGLSR ELGPQGITVN
LVLPGSTDTE ANPADGESAD FQRGLTSIGR YAEPREIANA VVFLASPAAN MVTGISLTVD
GGANA
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