| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3486 |
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| Symbol | |
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| ID | 5077635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 88758 |
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| End bp | 89519 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481210 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001165872 |
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| Protein GI | 146275712 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCTCG GACTCAAGGG CAAGAAGGTC ATCCTGACCG GCGGGAGCCG CGGCATCGGC
CGGGCGACGG CGGAACTGCT CGCCGCCGAA GGCGCGGACA TCGCGTTCTG CTCGCGCAAT
CCGGAACAGG TCGCCGAAAC CGTCGCCAGC CTCGAAAAGC ATGGCGGCAA GATCTACGGT
TCGGCCTTCG ACATGGATTC CGGACATGAC GCCTACCGCG CCTGGCTGAC CGACGCGGCA
GAAAAGCTCG GCGGTTGCGA CATCTTCATC CCGATGATCT CGACCTCGGG CTCGGGCCAG
ACCGGCGACT GGCAGAAGGG CCTCGATCAC GACATCATGG GTTCCGTCAT CGGCGTCGAA
GTGCTGGAGC AGTACCTCGA AAAGTCGTCC TCGCCTTCGG TCGTCATCCT CTCGTCGACG
GCGGGCCTCG AGACCTTCAT CGTGCCGCAG GGCTACAATG CGCTGAAGGG TGCGCTGATC
GTCTATGCCG GCCAGCTCAG CCAGGCGCTC GGTCCCAAGG GCATTCGCGT GAACACCGTC
TCGCCCGGTC CGATCAAGTT CACCGGCGGT AGCTGGGACG TGATCGAAGG CGCGGCGCCC
GATCTCTACA AGTCGGTGGA GGCCGGCTTT GCCCTCGGCC GATTCGGCGC GCCCGATGAG
GTGGCCAAGG CGGTCGTGTT CCTCGCCAGC CCGGCTTCGT CCTACACCAC CGGCACCAAC
CTGGTGGTCG ACGGCGGCTT CACCAAGCGC ATCCAGTTCT GA
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| Protein sequence | MDLGLKGKKV ILTGGSRGIG RATAELLAAE GADIAFCSRN PEQVAETVAS LEKHGGKIYG
SAFDMDSGHD AYRAWLTDAA EKLGGCDIFI PMISTSGSGQ TGDWQKGLDH DIMGSVIGVE
VLEQYLEKSS SPSVVILSST AGLETFIVPQ GYNALKGALI VYAGQLSQAL GPKGIRVNTV
SPGPIKFTGG SWDVIEGAAP DLYKSVEAGF ALGRFGAPDE VAKAVVFLAS PASSYTTGTN
LVVDGGFTKR IQF
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